List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MARSMKLACVALVICMVVIAPMAEAALSCGTVSADMAPCVTYLQAPNNASPPPPCCAGVK
KLLAAATTTPDRQAACNCLKSAAGSIPKLNTNNAAALPGKCGVSIPYKISTSTNCNTVRF

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
46       54 PNNASPPPP       6.115       Click here for PD Search       Click here for Cross-React search
67       75 TTTPDRQAA       5.309       Click here for PD Search       Click here for Cross-React search
66       74 ATTTPDRQA       5.309       Click here for PD Search       Click here for Cross-React search
65       73 AATTTPDRQ       5.309       Click here for PD Search       Click here for Cross-React search
44       52 QAPNNASPP       4.474       Click here for PD Search       Click here for Cross-React search
106       114 PYKISTSTN       4.037       Click here for PD Search       Click here for Cross-React search
45       53 APNNASPPP       3.995       Click here for PD Search       Click here for Cross-React search
64       72 AAATTTPDR       3.097       Click here for PD Search       Click here for Cross-React search
87       95 PKLNTNNAA       3.086       Click here for PD Search       Click here for Cross-React search
85       93 SIPKLNTNN       2.841       Click here for PD Search       Click here for Cross-React search
41       49 TYLQAPNNA       2.604       Click here for PD Search       Click here for Cross-React search
42       50 YLQAPNNAS       2.418       Click here for PD Search       Click here for Cross-React search
43       51 LQAPNNASP       2.386       Click here for PD Search       Click here for Cross-React search
69       77 TPDRQAACN       2.197       Click here for PD Search       Click here for Cross-React search
86       94 IPKLNTNNA       2.141       Click here for PD Search       Click here for Cross-React search
47       55 NNASPPPPC       2.12       Click here for PD Search       Click here for Cross-React search
88       96 KLNTNNAAA       2.016       Click here for PD Search       Click here for Cross-React search
68       76 TTPDRQAAC       1.972       Click here for PD Search       Click here for Cross-React search
40       48 VTYLQAPNN       1.913       Click here for PD Search       Click here for Cross-React search
105       113 IPYKISTST       1.76       Click here for PD Search       Click here for Cross-React search
84       92 GSIPKLNTN       1.748       Click here for PD Search       Click here for Cross-React search
104       112 SIPYKISTS       1.634       Click here for PD Search       Click here for Cross-React search
111       119 TSTNCNTVR       1.604       Click here for PD Search       Click here for Cross-React search
90       98 NTNNAAALP       1.559       Click here for PD Search       Click here for Cross-React search
80       88 KSAAGSIPK       1.554       Click here for PD Search       Click here for Cross-React search
108       116 KISTSTNCN       1.436       Click here for PD Search       Click here for Cross-React search
107       115 YKISTSTNC       1.399       Click here for PD Search       Click here for Cross-React search
92       100 NNAAALPGK       1.329       Click here for PD Search       Click here for Cross-React search
63       71 LAAATTTPD       1.304       Click here for PD Search       Click here for Cross-React search
60       68 KKLLAAATT       1.154       Click here for PD Search       Click here for Cross-React search
83       91 AGSIPKLNT       1.098       Click here for PD Search       Click here for Cross-React search
110       118 STSTNCNTV       1.097       Click here for PD Search       Click here for Cross-React search
109       117 ISTSTNCNT       1.036       Click here for PD Search       Click here for Cross-React search
112       120 STNCNTVRF       0.962       Click here for PD Search       Click here for Cross-React search
91       99 TNNAAALPG       0.959       Click here for PD Search       Click here for Cross-React search
103       111 VSIPYKIST       0.905       Click here for PD Search       Click here for Cross-React search
61       69 KLLAAATTT       0.833       Click here for PD Search       Click here for Cross-React search
89       97 LNTNNAAAL       0.831       Click here for PD Search       Click here for Cross-React search
70       78 PDRQAACNC       0.816       Click here for PD Search       Click here for Cross-React search
82       90 AAGSIPKLN       0.769       Click here for PD Search       Click here for Cross-React search
30       38 GTVSADMAP       0.732       Click here for PD Search       Click here for Cross-React search
100       108 KCGVSIPYK       0.708       Click here for PD Search       Click here for Cross-React search
48       56 NASPPPPCC       0.707       Click here for PD Search       Click here for Cross-React search
62       70 LLAAATTTP       0.644       Click here for PD Search       Click here for Cross-React search
81       89 SAAGSIPKL       0.641       Click here for PD Search       Click here for Cross-React search
79       87 LKSAAGSIP       0.641       Click here for PD Search       Click here for Cross-React search
39       47 CVTYLQAPN       0.638       Click here for PD Search       Click here for Cross-React search
102       110 GVSIPYKIS       0.621       Click here for PD Search       Click here for Cross-React search
38       46 PCVTYLQAP       0.613       Click here for PD Search       Click here for Cross-React search
20       28 APMAEAALS       0.603       Click here for PD Search       Click here for Cross-React search
59       67 VKKLLAAAT       0.593       Click here for PD Search       Click here for Cross-React search
72       80 RQAACNCLK       0.521       Click here for PD Search       Click here for Cross-React search
77       85 NCLKSAAGS       0.509       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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