List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MARTQQLAVVATAVVALVLLAAATSEAAISCGQVASAIAPCISYARGQGSGPSAGCCSGV
RSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRYS
RRMHASAD

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
118       126 RYSRRMHAS       5.431       Click here for PD Search       Click here for Cross-React search
117       125 SRYSRRMHA       5.431       Click here for PD Search       Click here for Cross-React search
114       122 TDCSRYSRR       5.158       Click here for PD Search       Click here for Cross-React search
68       76 RTTADRRAA       5.088       Click here for PD Search       Click here for Cross-React search
67       75 ARTTADRRA       5.088       Click here for PD Search       Click here for Cross-React search
66       74 AARTTADRR       5.088       Click here for PD Search       Click here for Cross-React search
65       73 NAARTTADR       4.177       Click here for PD Search       Click here for Cross-React search
115       123 DCSRYSRRM       3.537       Click here for PD Search       Click here for Cross-React search
113       121 STDCSRYSR       3.529       Click here for PD Search       Click here for Cross-React search
64       72 NNAARTTAD       3.43       Click here for PD Search       Click here for Cross-React search
61       69 RSLNNAART       3.049       Click here for PD Search       Click here for Cross-React search
120       128 SRRMHASAD       2.986       Click here for PD Search       Click here for Cross-React search
107       115 PYTISTSTD       2.891       Click here for PD Search       Click here for Cross-React search
116       124 CSRYSRRMH       2.882       Click here for PD Search       Click here for Cross-React search
119       127 YSRRMHASA       2.801       Click here for PD Search       Click here for Cross-React search
112       120 TSTDCSRYS       2.6       Click here for PD Search       Click here for Cross-React search
111       119 STSTDCSRY       2.6       Click here for PD Search       Click here for Cross-React search
62       70 SLNNAARTT       2.247       Click here for PD Search       Click here for Cross-React search
44       52 YARGQGSGP       2.036       Click here for PD Search       Click here for Cross-React search
43       51 SYARGQGSG       1.765       Click here for PD Search       Click here for Cross-React search
46       54 RGQGSGPSA       1.741       Click here for PD Search       Click here for Cross-React search
45       53 ARGQGSGPS       1.741       Click here for PD Search       Click here for Cross-React search
63       71 LNNAARTTA       1.694       Click here for PD Search       Click here for Cross-React search
60       68 VRSLNNAAR       1.568       Click here for PD Search       Click here for Cross-React search
70       78 TADRRAACN       1.552       Click here for PD Search       Click here for Cross-React search
69       77 TTADRRAAC       1.392       Click here for PD Search       Click here for Cross-React search
42       50 ISYARGQGS       1.25       Click here for PD Search       Click here for Cross-React search
106       114 IPYTISTST       1.214       Click here for PD Search       Click here for Cross-React search
93       101 GNAASIPSK       1.194       Click here for PD Search       Click here for Cross-React search
110       118 ISTSTDCSR       1.163       Click here for PD Search       Click here for Cross-React search
105       113 SIPYTISTS       1.127       Click here for PD Search       Click here for Cross-React search
58       66 SGVRSLNNA       1.051       Click here for PD Search       Click here for Cross-React search
108       116 YTISTSTDC       1.002       Click here for PD Search       Click here for Cross-React search
1       9 MARTQQLAV       0.99       Click here for PD Search       Click here for Cross-React search
47       55 GQGSGPSAG       0.88       Click here for PD Search       Click here for Cross-React search
109       117 TISTSTDCS       0.857       Click here for PD Search       Click here for Cross-React search
59       67 GVRSLNNAA       0.792       Click here for PD Search       Click here for Cross-React search
40       48 PCISYARGQ       0.781       Click here for PD Search       Click here for Cross-React search
3       11 RTQQLAVVA       0.742       Click here for PD Search       Click here for Cross-React search
2       10 ARTQQLAVV       0.742       Click here for PD Search       Click here for Cross-React search
91       99 NAGNAASIP       0.724       Click here for PD Search       Click here for Cross-React search
94       102 NAASIPSKC       0.647       Click here for PD Search       Click here for Cross-React search
104       112 VSIPYTIST       0.624       Click here for PD Search       Click here for Cross-React search
22       30 AATSEAAIS       0.619       Click here for PD Search       Click here for Cross-React search
81       89 KNAAAGVSG       0.61       Click here for PD Search       Click here for Cross-React search
92       100 AGNAASIPS       0.603       Click here for PD Search       Click here for Cross-React search
71       79 ADRRAACNC       0.576       Click here for PD Search       Click here for Cross-React search
73       81 RRAACNCLK       0.563       Click here for PD Search       Click here for Cross-React search
57       65 CSGVRSLNN       0.558       Click here for PD Search       Click here for Cross-React search
20       28 LAAATSEAA       0.549       Click here for PD Search       Click here for Cross-React search
4       12 TQQLAVVAT       0.547       Click here for PD Search       Click here for Cross-React search
89       97 GLNAGNAAS       0.545       Click here for PD Search       Click here for Cross-React search
88       96 SGLNAGNAA       0.545       Click here for PD Search       Click here for Cross-React search
80       88 LKNAAAGVS       0.508       Click here for PD Search       Click here for Cross-React search
41       49 CISYARGQG       0.5       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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