List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MARVAALLVALLFVANAAAFRTTITTMEIDEDIDNPRRRGESCREQIQRQQYLNRCQDYL
RQQCRSGGYDEDNQRQHFRQCCQQLSQMEEQCQCEGLRQAVRQQQQEEGIRGEEMEEMVQ
CASDLPKECGISSRSCEIRRSWF

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
69       77 YDEDNQRQH       6.204       Click here for PD Search       Click here for Cross-React search
34       42 DNPRRRGES       4.57       Click here for PD Search       Click here for Cross-React search
68       76 GYDEDNQRQ       4.512       Click here for PD Search       Click here for Cross-React search
44       52 REQIQRQQY       4.186       Click here for PD Search       Click here for Cross-React search
31       39 EDIDNPRRR       4.034       Click here for PD Search       Click here for Cross-React search
72       80 DNQRQHFRQ       4.021       Click here for PD Search       Click here for Cross-React search
71       79 EDNQRQHFR       4.021       Click here for PD Search       Click here for Cross-React search
30       38 DEDIDNPRR       3.44       Click here for PD Search       Click here for Cross-React search
70       78 DEDNQRQHF       3.429       Click here for PD Search       Click here for Cross-React search
98       106 RQAVRQQQQ       2.858       Click here for PD Search       Click here for Cross-React search
67       75 GGYDEDNQR       2.578       Click here for PD Search       Click here for Cross-React search
100       108 AVRQQQQEE       2.527       Click here for PD Search       Click here for Cross-React search
99       107 QAVRQQQQE       2.527       Click here for PD Search       Click here for Cross-React search
101       109 VRQQQQEEG       2.475       Click here for PD Search       Click here for Cross-React search
33       41 IDNPRRRGE       2.391       Click here for PD Search       Click here for Cross-React search
103       111 QQQQEEGIR       2.338       Click here for PD Search       Click here for Cross-React search
102       110 RQQQQEEGI       2.338       Click here for PD Search       Click here for Cross-React search
32       40 DIDNPRRRG       2.305       Click here for PD Search       Click here for Cross-React search
37       45 RRRGESCRE       2.001       Click here for PD Search       Click here for Cross-React search
65       73 RSGGYDEDN       1.995       Click here for PD Search       Click here for Cross-React search
83       91 QQLSQMEEQ       1.882       Click here for PD Search       Click here for Cross-React search
47       55 IQRQQYLNR       1.851       Click here for PD Search       Click here for Cross-React search
36       44 PRRRGESCR       1.787       Click here for PD Search       Click here for Cross-React search
38       46 RRGESCREQ       1.769       Click here for PD Search       Click here for Cross-React search
66       74 SGGYDEDNQ       1.764       Click here for PD Search       Click here for Cross-React search
45       53 EQIQRQQYL       1.763       Click here for PD Search       Click here for Cross-React search
46       54 QIQRQQYLN       1.637       Click here for PD Search       Click here for Cross-React search
57       65 QDYLRQQCR       1.47       Click here for PD Search       Click here for Cross-React search
55       63 RCQDYLRQQ       1.47       Click here for PD Search       Click here for Cross-React search
35       43 NPRRRGESC       1.467       Click here for PD Search       Click here for Cross-React search
43       51 CREQIQRQQ       1.432       Click here for PD Search       Click here for Cross-React search
49       57 RQQYLNRCQ       1.416       Click here for PD Search       Click here for Cross-React search
48       56 QRQQYLNRC       1.416       Click here for PD Search       Click here for Cross-React search
54       62 NRCQDYLRQ       1.365       Click here for PD Search       Click here for Cross-React search
97       105 LRQAVRQQQ       1.361       Click here for PD Search       Click here for Cross-React search
106       114 QEEGIRGEE       1.336       Click here for PD Search       Click here for Cross-React search
105       113 QQEEGIRGE       1.336       Click here for PD Search       Click here for Cross-React search
104       112 QQQEEGIRG       1.336       Click here for PD Search       Click here for Cross-React search
73       81 NQRQHFRQC       1.291       Click here for PD Search       Click here for Cross-React search
29       37 IDEDIDNPR       1.231       Click here for PD Search       Click here for Cross-React search
50       58 QQYLNRCQD       1.207       Click here for PD Search       Click here for Cross-React search
58       66 DYLRQQCRS       1.137       Click here for PD Search       Click here for Cross-React search
42       50 SCREQIQRQ       1.108       Click here for PD Search       Click here for Cross-React search
41       49 ESCREQIQR       1.108       Click here for PD Search       Click here for Cross-React search
51       59 QYLNRCQDY       1.092       Click here for PD Search       Click here for Cross-React search
28       36 EIDEDIDNP       1.088       Click here for PD Search       Click here for Cross-React search
61       69 RQQCRSGGY       0.809       Click here for PD Search       Click here for Cross-React search
111       119 RGEEMEEMV       0.808       Click here for PD Search       Click here for Cross-React search
96       104 GLRQAVRQQ       0.778       Click here for PD Search       Click here for Cross-React search
95       103 EGLRQAVRQ       0.778       Click here for PD Search       Click here for Cross-React search
110       118 IRGEEMEEM       0.763       Click here for PD Search       Click here for Cross-React search
109       117 GIRGEEMEE       0.763       Click here for PD Search       Click here for Cross-React search
108       116 EGIRGEEME       0.763       Click here for PD Search       Click here for Cross-React search
107       115 EEGIRGEEM       0.763       Click here for PD Search       Click here for Cross-React search
133       141 SRSCEIRRS       0.75       Click here for PD Search       Click here for Cross-React search
132       140 SSRSCEIRR       0.75       Click here for PD Search       Click here for Cross-React search
112       120 GEEMEEMVQ       0.715       Click here for PD Search       Click here for Cross-React search
27       35 MEIDEDIDN       0.697       Click here for PD Search       Click here for Cross-React search
63       71 QCRSGGYDE       0.69       Click here for PD Search       Click here for Cross-React search
62       70 QQCRSGGYD       0.69       Click here for PD Search       Click here for Cross-React search
59       67 YLRQQCRSG       0.674       Click here for PD Search       Click here for Cross-React search
64       72 CRSGGYDED       0.665       Click here for PD Search       Click here for Cross-React search
53       61 LNRCQDYLR       0.65       Click here for PD Search       Click here for Cross-React search
39       47 RGESCREQI       0.633       Click here for PD Search       Click here for Cross-React search
26       34 TMEIDEDID       0.625       Click here for PD Search       Click here for Cross-React search
120       128 QCASDLPKE       0.591       Click here for PD Search       Click here for Cross-React search
134       142 RSCEIRRSW       0.589       Click here for PD Search       Click here for Cross-React search
85       93 LSQMEEQCQ       0.582       Click here for PD Search       Click here for Cross-React search
84       92 QLSQMEEQC       0.582       Click here for PD Search       Click here for Cross-React search
82       90 CQQLSQMEE       0.582       Click here for PD Search       Click here for Cross-React search
20       28 FRTTITTME       0.564       Click here for PD Search       Click here for Cross-React search
40       48 GESCREQIQ       0.56       Click here for PD Search       Click here for Cross-React search
25       33 TTMEIDEDI       0.54       Click here for PD Search       Click here for Cross-React search
24       32 ITTMEIDED       0.54       Click here for PD Search       Click here for Cross-React search
52       60 YLNRCQDYL       0.52       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

Thanks for using SDAP Database