List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MASSSSFLLAMAALAALLAVGSCSTLMTWTIGKDSTSTRLVLVASADVSEVAVKDKGATD
FSDDLKESPAKTFTYESKEPIKGPLSVRFAVKGQGYRTTDDVIPADFKPGSVYKTKEQV


Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
71       79 KTFTYESKE       4.435       Click here for PD Search       Click here for Cross-React search
74       82 TYESKEPIK       3.847       Click here for PD Search       Click here for Cross-React search
92       100 KGQGYRTTD       3.535       Click here for PD Search       Click here for Cross-React search
72       80 TFTYESKEP       3.429       Click here for PD Search       Click here for Cross-React search
63       71 DDLKESPAK       3.256       Click here for PD Search       Click here for Cross-React search
93       101 GQGYRTTDD       2.952       Click here for PD Search       Click here for Cross-React search
64       72 DLKESPAKT       2.814       Click here for PD Search       Click here for Cross-React search
108       116 KPGSVYKTK       2.688       Click here for PD Search       Click here for Cross-React search
75       83 YESKEPIKG       2.638       Click here for PD Search       Click here for Cross-React search
110       118 GSVYKTKEQ       2.607       Click here for PD Search       Click here for Cross-React search
76       84 ESKEPIKGP       2.603       Click here for PD Search       Click here for Cross-React search
70       78 AKTFTYESK       2.587       Click here for PD Search       Click here for Cross-React search
66       74 KESPAKTFT       2.553       Click here for PD Search       Click here for Cross-React search
109       117 PGSVYKTKE       2.328       Click here for PD Search       Click here for Cross-React search
94       102 QGYRTTDDV       2.214       Click here for PD Search       Click here for Cross-React search
62       70 SDDLKESPA       2.182       Click here for PD Search       Click here for Cross-React search
59       67 TDFSDDLKE       2.175       Click here for PD Search       Click here for Cross-React search
60       68 DFSDDLKES       2.02       Click here for PD Search       Click here for Cross-React search
69       77 PAKTFTYES       2.001       Click here for PD Search       Click here for Cross-React search
68       76 SPAKTFTYE       2.001       Click here for PD Search       Click here for Cross-React search
67       75 ESPAKTFTY       2.001       Click here for PD Search       Click here for Cross-React search
111       119 SVYKTKEQV       1.955       Click here for PD Search       Click here for Cross-React search
32       40 GKDSTSTRL       1.95       Click here for PD Search       Click here for Cross-React search
61       69 FSDDLKESP       1.87       Click here for PD Search       Click here for Cross-React search
54       62 KDKGATDFS       1.823       Click here for PD Search       Click here for Cross-React search
73       81 FTYESKEPI       1.666       Click here for PD Search       Click here for Cross-React search
31       39 IGKDSTSTR       1.657       Click here for PD Search       Click here for Cross-React search
91       99 VKGQGYRTT       1.571       Click here for PD Search       Click here for Cross-React search
56       64 KGATDFSDD       1.523       Click here for PD Search       Click here for Cross-React search
55       63 DKGATDFSD       1.523       Click here for PD Search       Click here for Cross-React search
33       41 KDSTSTRLV       1.462       Click here for PD Search       Click here for Cross-React search
65       73 LKESPAKTF       1.459       Click here for PD Search       Click here for Cross-React search
96       104 YRTTDDVIP       1.4       Click here for PD Search       Click here for Cross-React search
106       114 DFKPGSVYK       1.347       Click here for PD Search       Click here for Cross-React search
58       66 ATDFSDDLK       1.269       Click here for PD Search       Click here for Cross-React search
78       86 KEPIKGPLS       1.24       Click here for PD Search       Click here for Cross-React search
77       85 SKEPIKGPL       1.24       Click here for PD Search       Click here for Cross-React search
30       38 TIGKDSTST       1.221       Click here for PD Search       Click here for Cross-React search
52       60 AVKDKGATD       1.178       Click here for PD Search       Click here for Cross-React search
107       115 FKPGSVYKT       1.164       Click here for PD Search       Click here for Cross-React search
90       98 AVKGQGYRT       1.1       Click here for PD Search       Click here for Cross-React search
53       61 VKDKGATDF       1.01       Click here for PD Search       Click here for Cross-React search
28       36 TWTIGKDST       0.958       Click here for PD Search       Click here for Cross-React search
97       105 RTTDDVIPA       0.903       Click here for PD Search       Click here for Cross-React search
95       103 GYRTTDDVI       0.896       Click here for PD Search       Click here for Cross-React search
29       37 WTIGKDSTS       0.89       Click here for PD Search       Click here for Cross-React search
49       57 SEVAVKDKG       0.834       Click here for PD Search       Click here for Cross-React search
98       106 TTDDVIPAD       0.77       Click here for PD Search       Click here for Cross-React search
105       113 ADFKPGSVY       0.68       Click here for PD Search       Click here for Cross-React search
104       112 PADFKPGSV       0.671       Click here for PD Search       Click here for Cross-React search
89       97 FAVKGQGYR       0.66       Click here for PD Search       Click here for Cross-React search
88       96 RFAVKGQGY       0.66       Click here for PD Search       Click here for Cross-React search
27       35 MTWTIGKDS       0.657       Click here for PD Search       Click here for Cross-React search
100       108 DDVIPADFK       0.64       Click here for PD Search       Click here for Cross-React search
103       111 IPADFKPGS       0.634       Click here for PD Search       Click here for Cross-React search
57       65 GATDFSDDL       0.628       Click here for PD Search       Click here for Cross-React search
50       58 EVAVKDKGA       0.628       Click here for PD Search       Click here for Cross-React search
48       56 VSEVAVKDK       0.625       Click here for PD Search       Click here for Cross-React search
34       42 DSTSTRLVL       0.603       Click here for PD Search       Click here for Cross-React search
101       109 DVIPADFKP       0.593       Click here for PD Search       Click here for Cross-React search
51       59 VAVKDKGAT       0.524       Click here for PD Search       Click here for Cross-React search
47       55 DVSEVAVKD       0.522       Click here for PD Search       Click here for Cross-React search
80       88 PIKGPLSVR       0.52       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/


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