List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MASSTAMKLSLVALLCIVVALPIAQAITCGQVASNISPCLTYVKSGGAVPAACCSGIRNL
NGMAKTTADRQAACNCLKQAAGGIKGLNPNLAAGLPGKCGVSVPYKISTTTNCAAVK


Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
65       73 KTTADRQAA       6.826       Click here for PD Search       Click here for Cross-React search
64       72 AKTTADRQA       6.826       Click here for PD Search       Click here for Cross-React search
63       71 MAKTTADRQ       6.687       Click here for PD Search       Click here for Cross-React search
104       112 PYKISTTTN       6.174       Click here for PD Search       Click here for Cross-React search
62       70 GMAKTTADR       3.821       Click here for PD Search       Click here for Cross-React search
58       66 RNLNGMAKT       3.347       Click here for PD Search       Click here for Cross-React search
61       69 NGMAKTTAD       3.137       Click here for PD Search       Click here for Cross-React search
103       111 VPYKISTTT       2.849       Click here for PD Search       Click here for Cross-React search
102       110 SVPYKISTT       2.646       Click here for PD Search       Click here for Cross-React search
59       67 NLNGMAKTT       2.466       Click here for PD Search       Click here for Cross-React search
105       113 YKISTTTNC       2.14       Click here for PD Search       Click here for Cross-React search
67       75 TADRQAACN       2.039       Click here for PD Search       Click here for Cross-React search
66       74 TTADRQAAC       1.83       Click here for PD Search       Click here for Cross-React search
57       65 IRNLNGMAK       1.626       Click here for PD Search       Click here for Cross-React search
2       10 ASSTAMKLS       1.623       Click here for PD Search       Click here for Cross-React search
60       68 LNGMAKTTA       1.549       Click here for PD Search       Click here for Cross-React search
85       93 KGLNPNLAA       1.541       Click here for PD Search       Click here for Cross-React search
106       114 KISTTTNCA       1.38       Click here for PD Search       Click here for Cross-React search
101       109 VSVPYKIST       1.361       Click here for PD Search       Click here for Cross-React search
78       86 KQAAGGIKG       1.348       Click here for PD Search       Click here for Cross-React search
3       11 SSTAMKLSL       1.325       Click here for PD Search       Click here for Cross-React search
82       90 GGIKGLNPN       1.257       Click here for PD Search       Click here for Cross-React search
1       9 MASSTAMKL       1.199       Click here for PD Search       Click here for Cross-React search
88       96 NPNLAAGLP       1.192       Click here for PD Search       Click here for Cross-React search
37       45 SPCLTYVKS       1.156       Click here for PD Search       Click here for Cross-React search
30       38 GQVASNISP       1.129       Click here for PD Search       Click here for Cross-React search
77       85 LKQAAGGIK       1.123       Click here for PD Search       Click here for Cross-React search
109       117 TTTNCAAVK       1.101       Click here for PD Search       Click here for Cross-React search
84       92 IKGLNPNLA       1.07       Click here for PD Search       Click here for Cross-React search
55       63 SGIRNLNGM       1.067       Click here for PD Search       Click here for Cross-React search
98       106 KCGVSVPYK       1.065       Click here for PD Search       Click here for Cross-React search
83       91 GIKGLNPNL       1.048       Click here for PD Search       Click here for Cross-React search
40       48 LTYVKSGGA       1.03       Click here for PD Search       Click here for Cross-React search
42       50 YVKSGGAVP       0.993       Click here for PD Search       Click here for Cross-React search
90       98 NLAAGLPGK       0.949       Click here for PD Search       Click here for Cross-React search
100       108 GVSVPYKIS       0.933       Click here for PD Search       Click here for Cross-React search
41       49 TYVKSGGAV       0.927       Click here for PD Search       Click here for Cross-React search
34       42 SNISPCLTY       0.878       Click here for PD Search       Click here for Cross-React search
44       52 KSGGAVPAA       0.871       Click here for PD Search       Click here for Cross-React search
38       46 PCLTYVKSG       0.854       Click here for PD Search       Click here for Cross-React search
56       64 GIRNLNGMA       0.804       Click here for PD Search       Click here for Cross-React search
81       89 AGGIKGLNP       0.79       Click here for PD Search       Click here for Cross-React search
86       94 GLNPNLAAG       0.763       Click here for PD Search       Click here for Cross-React search
68       76 ADRQAACNC       0.757       Click here for PD Search       Click here for Cross-React search
70       78 RQAACNCLK       0.74       Click here for PD Search       Click here for Cross-React search
108       116 STTTNCAAV       0.738       Click here for PD Search       Click here for Cross-React search
4       12 STAMKLSLV       0.734       Click here for PD Search       Click here for Cross-React search
89       97 PNLAAGLPG       0.733       Click here for PD Search       Click here for Cross-React search
107       115 ISTTTNCAA       0.697       Click here for PD Search       Click here for Cross-React search
75       83 NCLKQAAGG       0.691       Click here for PD Search       Click here for Cross-React search
71       79 QAACNCLKQ       0.655       Click here for PD Search       Click here for Cross-React search
43       51 VKSGGAVPA       0.64       Click here for PD Search       Click here for Cross-React search
87       95 LNPNLAAGL       0.636       Click here for PD Search       Click here for Cross-React search
69       77 DRQAACNCL       0.618       Click here for PD Search       Click here for Cross-React search
31       39 QVASNISPC       0.611       Click here for PD Search       Click here for Cross-React search
36       44 ISPCLTYVK       0.605       Click here for PD Search       Click here for Cross-React search
54       62 CSGIRNLNG       0.578       Click here for PD Search       Click here for Cross-React search
33       41 ASNISPCLT       0.566       Click here for PD Search       Click here for Cross-React search
79       87 QAAGGIKGL       0.556       Click here for PD Search       Click here for Cross-React search
5       13 TAMKLSLVA       0.553       Click here for PD Search       Click here for Cross-React search
39       47 CLTYVKSGG       0.546       Click here for PD Search       Click here for Cross-React search
97       105 GKCGVSVPY       0.527       Click here for PD Search       Click here for Cross-React search
96       104 PGKCGVSVP       0.52       Click here for PD Search       Click here for Cross-React search
80       88 AAGGIKGLN       0.516       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/


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