List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MASSTAMKLSLVALLCIVVALPIAQAITCGQVASNISPCVTYVKSGGAVPAPCCSGIRNL
NGMAKTTADRQATCNCLKQAAGGIKGLNPNLAAGLPGKCGVSVPYKISTTTNCAAVK

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
65       73 KTTADRQAT       9.193       Click here for PD Search       Click here for Cross-React search
64       72 AKTTADRQA       6.435       Click here for PD Search       Click here for Cross-React search
63       71 MAKTTADRQ       6.303       Click here for PD Search       Click here for Cross-React search
104       112 PYKISTTTN       5.82       Click here for PD Search       Click here for Cross-React search
62       70 GMAKTTADR       3.602       Click here for PD Search       Click here for Cross-React search
58       66 RNLNGMAKT       3.155       Click here for PD Search       Click here for Cross-React search
61       69 NGMAKTTAD       2.957       Click here for PD Search       Click here for Cross-React search
67       75 TADRQATCN       2.746       Click here for PD Search       Click here for Cross-React search
103       111 VPYKISTTT       2.686       Click here for PD Search       Click here for Cross-React search
102       110 SVPYKISTT       2.494       Click here for PD Search       Click here for Cross-React search
66       74 TTADRQATC       2.464       Click here for PD Search       Click here for Cross-React search
59       67 NLNGMAKTT       2.325       Click here for PD Search       Click here for Cross-React search
105       113 YKISTTTNC       2.018       Click here for PD Search       Click here for Cross-React search
57       65 IRNLNGMAK       1.532       Click here for PD Search       Click here for Cross-React search
2       10 ASSTAMKLS       1.53       Click here for PD Search       Click here for Cross-React search
60       68 LNGMAKTTA       1.46       Click here for PD Search       Click here for Cross-React search
85       93 KGLNPNLAA       1.453       Click here for PD Search       Click here for Cross-React search
106       114 KISTTTNCA       1.301       Click here for PD Search       Click here for Cross-React search
101       109 VSVPYKIST       1.283       Click here for PD Search       Click here for Cross-React search
78       86 KQAAGGIKG       1.27       Click here for PD Search       Click here for Cross-React search
44       52 KSGGAVPAP       1.257       Click here for PD Search       Click here for Cross-React search
3       11 SSTAMKLSL       1.249       Click here for PD Search       Click here for Cross-React search
82       90 GGIKGLNPN       1.185       Click here for PD Search       Click here for Cross-React search
1       9 MASSTAMKL       1.13       Click here for PD Search       Click here for Cross-React search
88       96 NPNLAAGLP       1.123       Click here for PD Search       Click here for Cross-React search
30       38 GQVASNISP       1.064       Click here for PD Search       Click here for Cross-React search
77       85 LKQAAGGIK       1.059       Click here for PD Search       Click here for Cross-React search
109       117 TTTNCAAVK       1.038       Click here for PD Search       Click here for Cross-React search
68       76 ADRQATCNC       1.02       Click here for PD Search       Click here for Cross-React search
84       92 IKGLNPNLA       1.008       Click here for PD Search       Click here for Cross-React search
55       63 SGIRNLNGM       1.006       Click here for PD Search       Click here for Cross-React search
98       106 KCGVSVPYK       1.004       Click here for PD Search       Click here for Cross-React search
70       78 RQATCNCLK       0.997       Click here for PD Search       Click here for Cross-React search
83       91 GIKGLNPNL       0.988       Click here for PD Search       Click here for Cross-React search
37       45 SPCVTYVKS       0.981       Click here for PD Search       Click here for Cross-React search
42       50 YVKSGGAVP       0.936       Click here for PD Search       Click here for Cross-React search
90       98 NLAAGLPGK       0.894       Click here for PD Search       Click here for Cross-React search
71       79 QATCNCLKQ       0.881       Click here for PD Search       Click here for Cross-React search
100       108 GVSVPYKIS       0.88       Click here for PD Search       Click here for Cross-React search
41       49 TYVKSGGAV       0.874       Click here for PD Search       Click here for Cross-React search
40       48 VTYVKSGGA       0.874       Click here for PD Search       Click here for Cross-React search
69       77 DRQATCNCL       0.832       Click here for PD Search       Click here for Cross-React search
56       64 GIRNLNGMA       0.758       Click here for PD Search       Click here for Cross-React search
81       89 AGGIKGLNP       0.745       Click here for PD Search       Click here for Cross-React search
34       42 SNISPCVTY       0.745       Click here for PD Search       Click here for Cross-React search
38       46 PCVTYVKSG       0.724       Click here for PD Search       Click here for Cross-React search
86       94 GLNPNLAAG       0.719       Click here for PD Search       Click here for Cross-React search
108       116 STTTNCAAV       0.696       Click here for PD Search       Click here for Cross-React search
4       12 STAMKLSLV       0.692       Click here for PD Search       Click here for Cross-React search
89       97 PNLAAGLPG       0.691       Click here for PD Search       Click here for Cross-React search
107       115 ISTTTNCAA       0.657       Click here for PD Search       Click here for Cross-React search
75       83 NCLKQAAGG       0.651       Click here for PD Search       Click here for Cross-React search
43       51 VKSGGAVPA       0.604       Click here for PD Search       Click here for Cross-React search
87       95 LNPNLAAGL       0.599       Click here for PD Search       Click here for Cross-React search
31       39 QVASNISPC       0.576       Click here for PD Search       Click here for Cross-React search
54       62 CSGIRNLNG       0.545       Click here for PD Search       Click here for Cross-React search
79       87 QAAGGIKGL       0.524       Click here for PD Search       Click here for Cross-React search
5       13 TAMKLSLVA       0.522       Click here for PD Search       Click here for Cross-React search
73       81 TCNCLKQAA       0.514       Click here for PD Search       Click here for Cross-React search
72       80 ATCNCLKQA       0.514       Click here for PD Search       Click here for Cross-React search
36       44 ISPCVTYVK       0.513       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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