List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MATLNSACVVAVLCLVVLTAPTAHAAISCGQVTSSLASCIPFLTKGGPVPASCCSGVRSL
NAAAKTTPDRQAVCNCLKSAAGAIPGFNANNAGILPGKCGVSIPYKISTSTNCATIKF

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
64       72 AKTTPDRQA       9.872       Click here for PD Search       Click here for Cross-React search
63       71 AAKTTPDRQ       9.872       Click here for PD Search       Click here for Cross-React search
65       73 KTTPDRQAV       7.253       Click here for PD Search       Click here for Cross-React search
62       70 AAAKTTPDR       5.759       Click here for PD Search       Click here for Cross-React search
104       112 PYKISTSTN       5.417       Click here for PD Search       Click here for Cross-React search
61       69 NAAAKTTPD       4.728       Click here for PD Search       Click here for Cross-React search
58       66 RSLNAAAKT       2.746       Click here for PD Search       Click here for Cross-React search
103       111 IPYKISTST       2.361       Click here for PD Search       Click here for Cross-React search
60       68 LNAAAKTTP       2.335       Click here for PD Search       Click here for Cross-React search
102       110 SIPYKISTS       2.193       Click here for PD Search       Click here for Cross-React search
67       75 TPDRQAVCN       2.166       Click here for PD Search       Click here for Cross-React search
59       67 SLNAAAKTT       2.024       Click here for PD Search       Click here for Cross-React search
66       74 TTPDRQAVC       1.944       Click here for PD Search       Click here for Cross-React search
105       113 YKISTSTNC       1.878       Click here for PD Search       Click here for Cross-React search
44       52 TKGGPVPAS       1.801       Click here for PD Search       Click here for Cross-React search
85       93 PGFNANNAG       1.476       Click here for PD Search       Click here for Cross-React search
57       65 VRSLNAAAK       1.412       Click here for PD Search       Click here for Cross-React search
109       117 TSTNCATIK       1.304       Click here for PD Search       Click here for Cross-React search
101       109 VSIPYKIST       1.214       Click here for PD Search       Click here for Cross-React search
90       98 NNAGILPGK       1.213       Click here for PD Search       Click here for Cross-React search
106       114 KISTSTNCA       1.211       Click here for PD Search       Click here for Cross-React search
43       51 LTKGGPVPA       1.108       Click here for PD Search       Click here for Cross-React search
84       92 IPGFNANNA       1.045       Click here for PD Search       Click here for Cross-React search
83       91 AIPGFNANN       1.045       Click here for PD Search       Click here for Cross-React search
18       26 LTAPTAHAA       0.998       Click here for PD Search       Click here for Cross-React search
88       96 NANNAGILP       0.995       Click here for PD Search       Click here for Cross-React search
30       38 GQVTSSLAS       0.976       Click here for PD Search       Click here for Cross-React search
42       50 FLTKGGPVP       0.95       Click here for PD Search       Click here for Cross-React search
41       49 PFLTKGGPV       0.95       Click here for PD Search       Click here for Cross-React search
98       106 KCGVSIPYK       0.95       Click here for PD Search       Click here for Cross-React search
55       63 SGVRSLNAA       0.927       Click here for PD Search       Click here for Cross-React search
40       48 IPFLTKGGP       0.897       Click here for PD Search       Click here for Cross-React search
108       116 STSTNCATI       0.874       Click here for PD Search       Click here for Cross-React search
107       115 ISTSTNCAT       0.874       Click here for PD Search       Click here for Cross-React search
19       27 TAPTAHAAI       0.848       Click here for PD Search       Click here for Cross-React search
100       108 GVSIPYKIS       0.833       Click here for PD Search       Click here for Cross-React search
68       76 PDRQAVCNC       0.805       Click here for PD Search       Click here for Cross-React search
20       28 APTAHAAIS       0.788       Click here for PD Search       Click here for Cross-React search
110       118 STNCATIKF       0.782       Click here for PD Search       Click here for Cross-React search
78       86 KSAAGAIPG       0.778       Click here for PD Search       Click here for Cross-React search
17       25 VLTAPTAHA       0.733       Click here for PD Search       Click here for Cross-React search
56       64 GVRSLNAAA       0.699       Click here for PD Search       Click here for Cross-React search
86       94 GFNANNAGI       0.669       Click here for PD Search       Click here for Cross-React search
45       53 KGGPVPASC       0.669       Click here for PD Search       Click here for Cross-React search
77       85 LKSAAGAIP       0.648       Click here for PD Search       Click here for Cross-React search
82       90 GAIPGFNAN       0.643       Click here for PD Search       Click here for Cross-React search
89       97 ANNAGILPG       0.613       Click here for PD Search       Click here for Cross-React search
87       95 FNANNAGIL       0.557       Click here for PD Search       Click here for Cross-React search
16       24 VVLTAPTAH       0.539       Click here for PD Search       Click here for Cross-React search
31       39 QVTSSLASC       0.529       Click here for PD Search       Click here for Cross-React search
28       36 SCGQVTSSL       0.518       Click here for PD Search       Click here for Cross-React search
75       83 NCLKSAAGA       0.515       Click here for PD Search       Click here for Cross-React search
70       78 RQAVCNCLK       0.514       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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