List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MEKKMAGFCIFFLVLFLAQEYGVEGKVCLNLSDKFKGPCLGTKNCDHHCRDIEHLLSGVC
RDDFRCWCNRNC

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
30       38 NLSDKFKGP       4.641       Click here for PD Search       Click here for Cross-React search
18       26 AQEYGVEGK       3.527       Click here for PD Search       Click here for Cross-React search
43       51 KNCDHHCRD       2.758       Click here for PD Search       Click here for Cross-React search
46       54 DHHCRDIEH       2.642       Click here for PD Search       Click here for Cross-React search
19       27 QEYGVEGKV       2.591       Click here for PD Search       Click here for Cross-React search
29       37 LNLSDKFKG       2.475       Click here for PD Search       Click here for Cross-React search
42       50 TKNCDHHCR       2.383       Click here for PD Search       Click here for Cross-React search
40       48 LGTKNCDHH       1.853       Click here for PD Search       Click here for Cross-React search
36       44 KGPCLGTKN       1.833       Click here for PD Search       Click here for Cross-React search
32       40 SDKFKGPCL       1.547       Click here for PD Search       Click here for Cross-React search
31       39 LSDKFKGPC       1.547       Click here for PD Search       Click here for Cross-React search
17       25 LAQEYGVEG       1.454       Click here for PD Search       Click here for Cross-React search
57       65 SGVCRDDFR       1.442       Click here for PD Search       Click here for Cross-React search
50       58 RDIEHLLSG       1.438       Click here for PD Search       Click here for Cross-React search
28       36 CLNLSDKFK       1.341       Click here for PD Search       Click here for Cross-React search
62       70 DDFRCWCNR       1.328       Click here for PD Search       Click here for Cross-React search
61       69 RDDFRCWCN       1.328       Click here for PD Search       Click here for Cross-React search
47       55 HHCRDIEHL       1.305       Click here for PD Search       Click here for Cross-React search
63       71 DFRCWCNRN       1.279       Click here for PD Search       Click here for Cross-React search
16       24 FLAQEYGVE       1.272       Click here for PD Search       Click here for Cross-React search
41       49 GTKNCDHHC       1.204       Click here for PD Search       Click here for Cross-React search
26       34 KVCLNLSDK       1.149       Click here for PD Search       Click here for Cross-React search
33       41 DKFKGPCLG       1.142       Click here for PD Search       Click here for Cross-React search
45       53 CDHHCRDIE       1.041       Click here for PD Search       Click here for Cross-React search
35       43 FKGPCLGTK       0.987       Click here for PD Search       Click here for Cross-React search
34       42 KFKGPCLGT       0.987       Click here for PD Search       Click here for Cross-React search
44       52 NCDHHCRDI       0.967       Click here for PD Search       Click here for Cross-React search
1       9 MEKKMAGFC       0.929       Click here for PD Search       Click here for Cross-React search
38       46 PCLGTKNCD       0.829       Click here for PD Search       Click here for Cross-React search
20       28 EYGVEGKVC       0.802       Click here for PD Search       Click here for Cross-React search
48       56 HCRDIEHLL       0.791       Click here for PD Search       Click here for Cross-React search
49       57 CRDIEHLLS       0.779       Click here for PD Search       Click here for Cross-React search
39       47 CLGTKNCDH       0.73       Click here for PD Search       Click here for Cross-React search
2       10 EKKMAGFCI       0.658       Click here for PD Search       Click here for Cross-React search
59       67 VCRDDFRCW       0.613       Click here for PD Search       Click here for Cross-React search
56       64 LSGVCRDDF       0.607       Click here for PD Search       Click here for Cross-React search
15       23 LFLAQEYGV       0.606       Click here for PD Search       Click here for Cross-React search
14       22 VLFLAQEYG       0.606       Click here for PD Search       Click here for Cross-React search
24       32 EGKVCLNLS       0.59       Click here for PD Search       Click here for Cross-React search
55       63 LLSGVCRDD       0.578       Click here for PD Search       Click here for Cross-React search
58       66 GVCRDDFRC       0.577       Click here for PD Search       Click here for Cross-React search
25       33 GKVCLNLSD       0.569       Click here for PD Search       Click here for Cross-React search
51       59 DIEHLLSGV       0.545       Click here for PD Search       Click here for Cross-React search
13       21 LVLFLAQEY       0.505       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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