List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MFQSTFFLVLMVCVATARFANKDHCPPNEEYNECGNPCQEKCDNGEPVICTYQCEHRCFC
KQGYVRLTEDGECVPEEFCKPIHY

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
22       30 KDHCPPNEE       3.91       Click here for PD Search       Click here for Cross-React search
26       34 PPNEEYNEC       3.755       Click here for PD Search       Click here for Cross-React search
25       33 CPPNEEYNE       3.755       Click here for PD Search       Click here for Cross-React search
21       29 NKDHCPPNE       3.631       Click here for PD Search       Click here for Cross-React search
39       47 QEKCDNGEP       3.185       Click here for PD Search       Click here for Cross-React search
23       31 DHCPPNEEY       3.064       Click here for PD Search       Click here for Cross-React search
24       32 HCPPNEEYN       2.95       Click here for PD Search       Click here for Cross-React search
16       24 TARFANKDH       2.541       Click here for PD Search       Click here for Cross-React search
28       36 NEEYNECGN       2.499       Click here for PD Search       Click here for Cross-React search
29       37 EEYNECGNP       2.403       Click here for PD Search       Click here for Cross-React search
27       35 PNEEYNECG       2.403       Click here for PD Search       Click here for Cross-React search
61       69 KQGYVRLTE       2.24       Click here for PD Search       Click here for Cross-React search
20       28 ANKDHCPPN       2.118       Click here for PD Search       Click here for Cross-React search
15       23 ATARFANKD       1.887       Click here for PD Search       Click here for Cross-React search
64       72 YVRLTEDGE       1.87       Click here for PD Search       Click here for Cross-React search
62       70 QGYVRLTED       1.87       Click here for PD Search       Click here for Cross-React search
36       44 NPCQEKCDN       1.602       Click here for PD Search       Click here for Cross-React search
18       26 RFANKDHCP       1.445       Click here for PD Search       Click here for Cross-React search
40       48 EKCDNGEPV       1.365       Click here for PD Search       Click here for Cross-React search
69       77 EDGECVPEE       1.273       Click here for PD Search       Click here for Cross-React search
19       27 FANKDHCPP       1.141       Click here for PD Search       Click here for Cross-React search
38       46 CQEKCDNGE       1.104       Click here for PD Search       Click here for Cross-React search
63       71 GYVRLTEDG       1.069       Click here for PD Search       Click here for Cross-React search
68       76 TEDGECVPE       1.061       Click here for PD Search       Click here for Cross-React search
33       41 ECGNPCQEK       1.022       Click here for PD Search       Click here for Cross-React search
37       45 PCQEKCDNG       0.986       Click here for PD Search       Click here for Cross-React search
35       43 GNPCQEKCD       0.986       Click here for PD Search       Click here for Cross-React search
17       25 ARFANKDHC       0.944       Click here for PD Search       Click here for Cross-React search
76       84 EEFCKPIHY       0.896       Click here for PD Search       Click here for Cross-React search
75       83 PEEFCKPIH       0.884       Click here for PD Search       Click here for Cross-React search
14       22 VATARFANK       0.838       Click here for PD Search       Click here for Cross-React search
32       40 NECGNPCQE       0.822       Click here for PD Search       Click here for Cross-React search
31       39 YNECGNPCQ       0.744       Click here for PD Search       Click here for Cross-React search
30       38 EYNECGNPC       0.744       Click here for PD Search       Click here for Cross-React search
60       68 CKQGYVRLT       0.693       Click here for PD Search       Click here for Cross-React search
66       74 RLTEDGECV       0.64       Click here for PD Search       Click here for Cross-React search
65       73 VRLTEDGEC       0.64       Click here for PD Search       Click here for Cross-React search
70       78 DGECVPEEF       0.637       Click here for PD Search       Click here for Cross-React search
51       59 TYQCEHRCF       0.626       Click here for PD Search       Click here for Cross-React search
41       49 KCDNGEPVI       0.553       Click here for PD Search       Click here for Cross-React search
55       63 EHRCFCKQG       0.548       Click here for PD Search       Click here for Cross-React search
49       57 ICTYQCEHR       0.507       Click here for PD Search       Click here for Cross-React search
67       75 LTEDGECVP       0.505       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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