List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MGKRKAAAKPPPRKGMDKLDTVFSCPFCNHGSSVECRIDLKNLIGEANCQICQESFSTTA
NALTEAIDVYSEWIDECERVNTVEGDDGA

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
10       18 PPPRKGMDK       5.482       Click here for PD Search       Click here for Cross-React search
9       17 KPPPRKGMD       5.482       Click here for PD Search       Click here for Cross-React search
3       11 KRKAAAKPP       4.47       Click here for PD Search       Click here for Cross-React search
6       14 AAAKPPPRK       3.456       Click here for PD Search       Click here for Cross-React search
5       13 KAAAKPPPR       3.456       Click here for PD Search       Click here for Cross-React search
4       12 RKAAAKPPP       3.456       Click here for PD Search       Click here for Cross-React search
7       15 AAKPPPRKG       3.385       Click here for PD Search       Click here for Cross-React search
8       16 AKPPPRKGM       3.316       Click here for PD Search       Click here for Cross-React search
12       20 PRKGMDKLD       3.158       Click here for PD Search       Click here for Cross-React search
13       21 RKGMDKLDT       2.947       Click here for PD Search       Click here for Cross-React search
11       19 PPRKGMDKL       2.924       Click here for PD Search       Click here for Cross-React search
2       10 GKRKAAAKP       2.861       Click here for PD Search       Click here for Cross-React search
1       9 MGKRKAAAK       1.831       Click here for PD Search       Click here for Cross-React search
53       61 QESFSTTAN       1.827       Click here for PD Search       Click here for Cross-React search
78       86 ERVNTVEGD       1.437       Click here for PD Search       Click here for Cross-React search
79       87 RVNTVEGDD       1.385       Click here for PD Search       Click here for Cross-React search
14       22 KGMDKLDTV       1.117       Click here for PD Search       Click here for Cross-React search
68       76 DVYSEWIDE       1.112       Click here for PD Search       Click here for Cross-React search
57       65 STTANALTE       1.093       Click here for PD Search       Click here for Cross-React search
54       62 ESFSTTANA       1.066       Click here for PD Search       Click here for Cross-React search
71       79 SEWIDECER       1.041       Click here for PD Search       Click here for Cross-React search
81       89 NTVEGDDGA       0.953       Click here for PD Search       Click here for Cross-React search
64       72 TEAIDVYSE       0.923       Click here for PD Search       Click here for Cross-React search
70       78 YSEWIDECE       0.833       Click here for PD Search       Click here for Cross-React search
58       66 TTANALTEA       0.824       Click here for PD Search       Click here for Cross-React search
76       84 ECERVNTVE       0.807       Click here for PD Search       Click here for Cross-React search
75       83 DECERVNTV       0.778       Click here for PD Search       Click here for Cross-React search
74       82 IDECERVNT       0.735       Click here for PD Search       Click here for Cross-React search
80       88 VNTVEGDDG       0.7       Click here for PD Search       Click here for Cross-React search
65       73 EAIDVYSEW       0.673       Click here for PD Search       Click here for Cross-React search
16       24 MDKLDTVFS       0.655       Click here for PD Search       Click here for Cross-React search
52       60 CQESFSTTA       0.609       Click here for PD Search       Click here for Cross-React search
29       37 NHGSSVECR       0.607       Click here for PD Search       Click here for Cross-React search
72       80 EWIDECERV       0.577       Click here for PD Search       Click here for Cross-React search
56       64 FSTTANALT       0.546       Click here for PD Search       Click here for Cross-React search
35       43 ECRIDLKNL       0.539       Click here for PD Search       Click here for Cross-React search
73       81 WIDECERVN       0.535       Click here for PD Search       Click here for Cross-React search
39       47 DLKNLIGEA       0.513       Click here for PD Search       Click here for Cross-React search
55       63 SFSTTANAL       0.507       Click here for PD Search       Click here for Cross-React search
50       58 QICQESFST       0.507       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

Thanks for using SDAP Database