List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MGVFNYEAETTSVIPAARLFKAFILDGNKLIPKVSPQAVSSVENVEGNGGPGTIKKITFS
EGSPVKYVKERVEEVDHTNFKYSYTVIEGGFVGDKVEKICNEIKIVAAPDGGSILKITSK
YHTKGDHEVPAEHIKGGKERVEGLLKPVEAYLLAHTAEYNN


Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
120       128 KYHTKGDHE       5.773       Click here for PD Search       Click here for Cross-React search
118       126 TSKYHTKGD       4.738       Click here for PD Search       Click here for Cross-React search
119       127 SKYHTKGDH       4.467       Click here for PD Search       Click here for Cross-React search
66       74 KYVKERVEE       4.23       Click here for PD Search       Click here for Cross-React search
116       124 KITSKYHTK       4.019       Click here for PD Search       Click here for Cross-React search
76       84 DHTNFKYSY       3.619       Click here for PD Search       Click here for Cross-React search
77       85 HTNFKYSYT       3.128       Click here for PD Search       Click here for Cross-React search
69       77 KERVEEVDH       3.068       Click here for PD Search       Click here for Cross-React search
63       71 SPVKYVKER       2.923       Click here for PD Search       Click here for Cross-React search
132       140 EHIKGGKER       2.643       Click here for PD Search       Click here for Cross-React search
73       81 EEVDHTNFK       2.449       Click here for PD Search       Click here for Cross-React search
4       12 FNYEAETTS       2.223       Click here for PD Search       Click here for Cross-React search
74       82 EVDHTNFKY       2.216       Click here for PD Search       Click here for Cross-React search
70       78 ERVEEVDHT       2.214       Click here for PD Search       Click here for Cross-React search
121       129 YHTKGDHEV       2.142       Click here for PD Search       Click here for Cross-React search
122       130 HTKGDHEVP       2.114       Click here for PD Search       Click here for Cross-React search
71       79 RVEEVDHTN       2.056       Click here for PD Search       Click here for Cross-React search
135       143 KGGKERVEG       2.036       Click here for PD Search       Click here for Cross-React search
117       125 ITSKYHTKG       1.989       Click here for PD Search       Click here for Cross-React search
5       13 NYEAETTSV       1.905       Click here for PD Search       Click here for Cross-React search
124       132 KGDHEVPAE       1.884       Click here for PD Search       Click here for Cross-React search
65       73 VKYVKERVE       1.813       Click here for PD Search       Click here for Cross-React search
75       83 VDHTNFKYS       1.714       Click here for PD Search       Click here for Cross-React search
78       86 TNFKYSYTV       1.706       Click here for PD Search       Click here for Cross-React search
68       76 VKERVEEVD       1.673       Click here for PD Search       Click here for Cross-React search
115       123 LKITSKYHT       1.657       Click here for PD Search       Click here for Cross-React search
64       72 PVKYVKERV       1.619       Click here for PD Search       Click here for Cross-React search
67       75 YVKERVEEV       1.57       Click here for PD Search       Click here for Cross-React search
123       131 TKGDHEVPA       1.57       Click here for PD Search       Click here for Cross-React search
62       70 GSPVKYVKE       1.477       Click here for PD Search       Click here for Cross-React search
61       69 EGSPVKYVK       1.477       Click here for PD Search       Click here for Cross-React search
134       142 IKGGKERVE       1.442       Click here for PD Search       Click here for Cross-React search
138       146 KERVEGLLK       1.414       Click here for PD Search       Click here for Cross-React search
153       161 LAHTAEYNN       1.397       Click here for PD Search       Click here for Cross-React search
131       139 AEHIKGGKE       1.363       Click here for PD Search       Click here for Cross-React search
55       63 KKITFSEGS       1.299       Click here for PD Search       Click here for Cross-React search
125       133 GDHEVPAEH       1.282       Click here for PD Search       Click here for Cross-React search
3       11 VFNYEAETT       1.231       Click here for PD Search       Click here for Cross-React search
130       138 PAEHIKGGK       1.217       Click here for PD Search       Click here for Cross-React search
48       56 NGGPGTIKK       1.174       Click here for PD Search       Click here for Cross-React search
59       67 FSEGSPVKY       1.154       Click here for PD Search       Click here for Cross-React search
29       37 KLIPKVSPQ       1.147       Click here for PD Search       Click here for Cross-React search
133       141 HIKGGKERV       1.133       Click here for PD Search       Click here for Cross-React search
139       147 ERVEGLLKP       1.093       Click here for PD Search       Click here for Cross-React search
127       135 HEVPAEHIK       1.087       Click here for PD Search       Click here for Cross-React search
94       102 DKVEKICNE       1.082       Click here for PD Search       Click here for Cross-React search
28       36 NKLIPKVSP       1.065       Click here for PD Search       Click here for Cross-React search
58       66 TFSEGSPVK       1.063       Click here for PD Search       Click here for Cross-React search
43       51 ENVEGNGGP       1.039       Click here for PD Search       Click here for Cross-React search
81       89 KYSYTVIEG       1.02       Click here for PD Search       Click here for Cross-React search
56       64 KITFSEGSP       1.004       Click here for PD Search       Click here for Cross-React search
32       40 PKVSPQAVS       0.997       Click here for PD Search       Click here for Cross-React search
53       61 TIKKITFSE       0.991       Click here for PD Search       Click here for Cross-React search
60       68 SEGSPVKYV       0.99       Click here for PD Search       Click here for Cross-React search
25       33 LDGNKLIPK       0.944       Click here for PD Search       Click here for Cross-React search
40       48 SSVENVEGN       0.915       Click here for PD Search       Click here for Cross-React search
72       80 VEEVDHTNF       0.909       Click here for PD Search       Click here for Cross-React search
126       134 DHEVPAEHI       0.908       Click here for PD Search       Click here for Cross-React search
36       44 PQAVSSVEN       0.898       Click here for PD Search       Click here for Cross-React search
80       88 FKYSYTVIE       0.892       Click here for PD Search       Click here for Cross-React search
33       41 KVSPQAVSS       0.864       Click here for PD Search       Click here for Cross-React search
26       34 DGNKLIPKV       0.849       Click here for PD Search       Click here for Cross-React search
2       10 GVFNYEAET       0.844       Click here for PD Search       Click here for Cross-React search
136       144 GGKERVEGL       0.839       Click here for PD Search       Click here for Cross-React search
6       14 YEAETTSVI       0.83       Click here for PD Search       Click here for Cross-React search
79       87 NFKYSYTVI       0.829       Click here for PD Search       Click here for Cross-React search
7       15 EAETTSVIP       0.819       Click here for PD Search       Click here for Cross-React search
114       122 ILKITSKYH       0.805       Click here for PD Search       Click here for Cross-React search
113       121 SILKITSKY       0.793       Click here for PD Search       Click here for Cross-React search
128       136 EVPAEHIKG       0.791       Click here for PD Search       Click here for Cross-React search
35       43 SPQAVSSVE       0.748       Click here for PD Search       Click here for Cross-React search
50       58 GPGTIKKIT       0.747       Click here for PD Search       Click here for Cross-React search
152       160 LLAHTAEYN       0.716       Click here for PD Search       Click here for Cross-React search
137       145 GKERVEGLL       0.7       Click here for PD Search       Click here for Cross-React search
151       159 YLLAHTAEY       0.698       Click here for PD Search       Click here for Cross-React search
27       35 GNKLIPKVS       0.682       Click here for PD Search       Click here for Cross-React search
54       62 IKKITFSEG       0.679       Click here for PD Search       Click here for Cross-React search
41       49 SVENVEGNG       0.675       Click here for PD Search       Click here for Cross-React search
51       59 PGTIKKITF       0.653       Click here for PD Search       Click here for Cross-React search
90       98 GFVGDKVEK       0.651       Click here for PD Search       Click here for Cross-React search
21       29 KAFILDGNK       0.647       Click here for PD Search       Click here for Cross-React search
93       101 GDKVEKICN       0.618       Click here for PD Search       Click here for Cross-React search
44       52 NVEGNGGPG       0.594       Click here for PD Search       Click here for Cross-React search
47       55 GNGGPGTIK       0.581       Click here for PD Search       Click here for Cross-React search
1       9 MGVFNYEAE       0.579       Click here for PD Search       Click here for Cross-React search
30       38 LIPKVSPQA       0.579       Click here for PD Search       Click here for Cross-React search
52       60 GTIKKITFS       0.566       Click here for PD Search       Click here for Cross-React search
142       150 EGLLKPVEA       0.564       Click here for PD Search       Click here for Cross-React search
10       18 TTSVIPAAR       0.541       Click here for PD Search       Click here for Cross-React search
45       53 VEGNGGPGT       0.533       Click here for PD Search       Click here for Cross-React search
31       39 IPKVSPQAV       0.521       Click here for PD Search       Click here for Cross-React search
146       154 KPVEAYLLA       0.521       Click here for PD Search       Click here for Cross-React search
49       57 GGPGTIKKI       0.512       Click here for PD Search       Click here for Cross-React search
143       151 GLLKPVEAY       0.51       Click here for PD Search       Click here for Cross-React search
82       90 YSYTVIEGG       0.505       Click here for PD Search       Click here for Cross-React search
46       54 EGNGGPGTI       0.503       Click here for PD Search       Click here for Cross-React search
112       120 GSILKITSK       0.501       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/


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