List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MGVFNYEIEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFP
EGFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGDTLEKISNEIKIVATPNGGSILKINNK
YHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDAYN


Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
118       126 NNKYHTKGD       5.948       Click here for PD Search       Click here for Cross-React search
120       128 KYHTKGDHE       5.42       Click here for PD Search       Click here for Cross-React search
116       124 KINNKYHTK       5.045       Click here for PD Search       Click here for Cross-React search
119       127 NKYHTKGDH       5.033       Click here for PD Search       Click here for Cross-React search
66       74 KYVKDRVDE       3.693       Click here for PD Search       Click here for Cross-React search
76       84 DHTNFKYSY       3.398       Click here for PD Search       Click here for Cross-React search
77       85 HTNFKYSYS       2.727       Click here for PD Search       Click here for Cross-React search
69       77 KDRVDEVDH       2.678       Click here for PD Search       Click here for Cross-React search
130       138 KAEQIKASK       2.601       Click here for PD Search       Click here for Cross-React search
135       143 KASKEMGET       2.596       Click here for PD Search       Click here for Cross-React search
122       130 HTKGDHEVK       2.567       Click here for PD Search       Click here for Cross-React search
117       125 INNKYHTKG       2.497       Click here for PD Search       Click here for Cross-React search
124       132 KGDHEVKAE       2.287       Click here for PD Search       Click here for Cross-React search
131       139 AEQIKASKE       2.252       Click here for PD Search       Click here for Cross-React search
73       81 DEVDHTNFK       2.217       Click here for PD Search       Click here for Cross-React search
132       140 EQIKASKEM       2.206       Click here for PD Search       Click here for Cross-React search
74       82 EVDHTNFKY       2.08       Click here for PD Search       Click here for Cross-React search
115       123 LKINNKYHT       2.08       Click here for PD Search       Click here for Cross-React search
94       102 DTLEKISNE       2.037       Click here for PD Search       Click here for Cross-React search
121       129 YHTKGDHEV       2.011       Click here for PD Search       Click here for Cross-React search
63       71 FPFKYVKDR       1.995       Click here for PD Search       Click here for Cross-React search
125       133 GDHEVKAEQ       1.981       Click here for PD Search       Click here for Cross-React search
70       78 DRVDEVDHT       1.933       Click here for PD Search       Click here for Cross-React search
123       131 TKGDHEVKA       1.906       Click here for PD Search       Click here for Cross-React search
71       79 RVDEVDHTN       1.861       Click here for PD Search       Click here for Cross-React search
65       73 FKYVKDRVD       1.846       Click here for PD Search       Click here for Cross-React search
64       72 PFKYVKDRV       1.71       Click here for PD Search       Click here for Cross-React search
127       135 HEVKAEQIK       1.68       Click here for PD Search       Click here for Cross-React search
75       83 VDHTNFKYS       1.61       Click here for PD Search       Click here for Cross-React search
78       86 TNFKYSYSV       1.487       Click here for PD Search       Click here for Cross-React search
68       76 VKDRVDEVD       1.461       Click here for PD Search       Click here for Cross-React search
126       134 DHEVKAEQI       1.403       Click here for PD Search       Click here for Cross-React search
67       75 YVKDRVDEV       1.371       Click here for PD Search       Click here for Cross-React search
138       146 KEMGETLLR       1.277       Click here for PD Search       Click here for Cross-React search
134       142 IKASKEMGE       1.261       Click here for PD Search       Click here for Cross-React search
133       141 QIKASKEMG       1.261       Click here for PD Search       Click here for Cross-React search
128       136 EVKAEQIKA       1.247       Click here for PD Search       Click here for Cross-React search
96       104 LEKISNEIK       1.185       Click here for PD Search       Click here for Cross-React search
93       101 GDTLEKISN       1.164       Click here for PD Search       Click here for Cross-React search
48       56 NGGPGTIKK       1.103       Click here for PD Search       Click here for Cross-React search
136       144 ASKEMGETL       1.07       Click here for PD Search       Click here for Cross-React search
61       69 EGFPFKYVK       1.045       Click here for PD Search       Click here for Cross-React search
4       12 FNYEIEATS       1.014       Click here for PD Search       Click here for Cross-React search
114       122 ILKINNKYH       1.011       Click here for PD Search       Click here for Cross-React search
62       70 GFPFKYVKD       1.008       Click here for PD Search       Click here for Cross-React search
97       105 EKISNEIKI       1.007       Click here for PD Search       Click here for Cross-React search
53       61 TIKKISFPE       0.997       Click here for PD Search       Click here for Cross-React search
113       121 SILKINNKY       0.995       Click here for PD Search       Click here for Cross-React search
129       137 VKAEQIKAS       0.965       Click here for PD Search       Click here for Cross-React search
59       67 FPEGFPFKY       0.943       Click here for PD Search       Click here for Cross-React search
43       51 ENIEGNGGP       0.921       Click here for PD Search       Click here for Cross-React search
25       33 LDGDNLFPK       0.914       Click here for PD Search       Click here for Cross-React search
81       89 KYSYSVIEG       0.889       Click here for PD Search       Click here for Cross-React search
90       98 GPVGDTLEK       0.875       Click here for PD Search       Click here for Cross-React search
137       145 SKEMGETLL       0.874       Click here for PD Search       Click here for Cross-React search
5       13 NYEIEATSV       0.869       Click here for PD Search       Click here for Cross-React search
149       157 ESYLLAHSD       0.86       Click here for PD Search       Click here for Cross-React search
95       103 TLEKISNEI       0.855       Click here for PD Search       Click here for Cross-React search
55       63 KKISFPEGF       0.844       Click here for PD Search       Click here for Cross-React search
72       80 VDEVDHTNF       0.823       Click here for PD Search       Click here for Cross-React search
26       34 DGDNLFPKV       0.823       Click here for PD Search       Click here for Cross-React search
40       48 SSVENIEGN       0.811       Click here for PD Search       Click here for Cross-React search
60       68 PEGFPFKYV       0.808       Click here for PD Search       Click here for Cross-React search
58       66 SFPEGFPFK       0.806       Click here for PD Search       Click here for Cross-React search
29       37 NLFPKVAPQ       0.806       Click here for PD Search       Click here for Cross-React search
36       44 PQAISSVEN       0.796       Click here for PD Search       Click here for Cross-React search
80       88 FKYSYSVIE       0.778       Click here for PD Search       Click here for Cross-React search
28       36 DNLFPKVAP       0.778       Click here for PD Search       Click here for Cross-React search
79       87 NFKYSYSVI       0.722       Click here for PD Search       Click here for Cross-React search
54       62 IKKISFPEG       0.683       Click here for PD Search       Click here for Cross-React search
32       40 PKVAPQAIS       0.666       Click here for PD Search       Click here for Cross-React search
142       150 ETLLRAVES       0.655       Click here for PD Search       Click here for Cross-React search
56       64 KISFPEGFP       0.653       Click here for PD Search       Click here for Cross-React search
50       58 GPGTIKKIS       0.651       Click here for PD Search       Click here for Cross-React search
139       147 EMGETLLRA       0.645       Click here for PD Search       Click here for Cross-React search
112       120 GSILKINNK       0.629       Click here for PD Search       Click here for Cross-React search
91       99 PVGDTLEKI       0.62       Click here for PD Search       Click here for Cross-React search
108       116 TPNGGSILK       0.616       Click here for PD Search       Click here for Cross-React search
152       160 LLAHSDAYN       0.602       Click here for PD Search       Click here for Cross-React search
41       49 SVENIEGNG       0.599       Click here for PD Search       Click here for Cross-React search
143       151 TLLRAVESY       0.593       Click here for PD Search       Click here for Cross-React search
151       159 YLLAHSDAY       0.587       Click here for PD Search       Click here for Cross-React search
33       41 KVAPQAISS       0.577       Click here for PD Search       Click here for Cross-React search
52       60 GTIKKISFP       0.57       Click here for PD Search       Click here for Cross-React search
51       59 PGTIKKISF       0.57       Click here for PD Search       Click here for Cross-React search
3       11 VFNYEIEAT       0.561       Click here for PD Search       Click here for Cross-React search
47       55 GNGGPGTIK       0.546       Click here for PD Search       Click here for Cross-React search
92       100 VGDTLEKIS       0.537       Click here for PD Search       Click here for Cross-React search
44       52 NIEGNGGPG       0.527       Click here for PD Search       Click here for Cross-React search
102       110 EIKIVATPN       0.518       Click here for PD Search       Click here for Cross-React search
101       109 NEIKIVATP       0.518       Click here for PD Search       Click here for Cross-React search
21       29 KAFILDGDN       0.508       Click here for PD Search       Click here for Cross-React search
30       38 LFPKVAPQA       0.507       Click here for PD Search       Click here for Cross-React search
150       158 SYLLAHSDA       0.502       Click here for PD Search       Click here for Cross-React search
35       43 APQAISSVE       0.5       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/


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