List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MKFLILFALVAVAAAGQVKFTDCGKKEIASVAVDGCEGDLCVIHKSKPVHVIAEFTANQD
TCKIEVKVTGQLNGLEVPIPGIETDGCKVLKCPLKKGTKYTMNYSVNVPSVVPNIKTVVK
LLATGEHGVLACGAVNTDVKP


Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
95       103 KKGTKYTMN       8.842       Click here for PD Search       Click here for Cross-React search
93       101 PLKKGTKYT       7.085       Click here for PD Search       Click here for Cross-React search
96       104 KGTKYTMNY       6.928       Click here for PD Search       Click here for Cross-React search
97       105 GTKYTMNYS       4.642       Click here for PD Search       Click here for Cross-React search
94       102 LKKGTKYTM       4.534       Click here for PD Search       Click here for Cross-React search
99       107 KYTMNYSVN       3.88       Click here for PD Search       Click here for Cross-React search
98       106 TKYTMNYSV       3.482       Click here for PD Search       Click here for Cross-React search
91       99 KCPLKKGTK       3.359       Click here for PD Search       Click here for Cross-React search
19       27 KFTDCGKKE       3.298       Click here for PD Search       Click here for Cross-React search
53       61 AEFTANQDT       3.189       Click here for PD Search       Click here for Cross-React search
92       100 CPLKKGTKY       2.632       Click here for PD Search       Click here for Cross-React search
55       63 FTANQDTCK       1.954       Click here for PD Search       Click here for Cross-React search
57       65 ANQDTCKIE       1.898       Click here for PD Search       Click here for Cross-React search
59       67 QDTCKIEVK       1.734       Click here for PD Search       Click here for Cross-React search
54       62 EFTANQDTC       1.692       Click here for PD Search       Click here for Cross-React search
56       64 TANQDTCKI       1.582       Click here for PD Search       Click here for Cross-React search
52       60 IAEFTANQD       1.549       Click here for PD Search       Click here for Cross-React search
100       108 YTMNYSVNV       1.44       Click here for PD Search       Click here for Cross-React search
88       96 KVLKCPLKK       1.439       Click here for PD Search       Click here for Cross-React search
63       71 KIEVKVTGQ       1.423       Click here for PD Search       Click here for Cross-React search
101       109 TMNYSVNVP       1.421       Click here for PD Search       Click here for Cross-React search
133       141 GAVNTDVKP       1.42       Click here for PD Search       Click here for Cross-React search
18       26 VKFTDCGKK       1.414       Click here for PD Search       Click here for Cross-React search
58       66 NQDTCKIEV       1.395       Click here for PD Search       Click here for Cross-React search
90       98 LKCPLKKGT       1.385       Click here for PD Search       Click here for Cross-React search
21       29 TDCGKKEIA       1.349       Click here for PD Search       Click here for Cross-React search
65       73 EVKVTGQLN       1.346       Click here for PD Search       Click here for Cross-React search
102       110 MNYSVNVPS       1.319       Click here for PD Search       Click here for Cross-React search
44       52 HKSKPVHVI       1.275       Click here for PD Search       Click here for Cross-React search
43       51 IHKSKPVHV       1.275       Click here for PD Search       Click here for Cross-React search
42       50 VIHKSKPVH       1.275       Click here for PD Search       Click here for Cross-React search
22       30 DCGKKEIAS       1.252       Click here for PD Search       Click here for Cross-React search
109       117 PSVVPNIKT       1.235       Click here for PD Search       Click here for Cross-React search
17       25 QVKFTDCGK       1.224       Click here for PD Search       Click here for Cross-React search
83       91 ETDGCKVLK       1.166       Click here for PD Search       Click here for Cross-React search
14       22 AAGQVKFTD       1.165       Click here for PD Search       Click here for Cross-React search
20       28 FTDCGKKEI       1.156       Click here for PD Search       Click here for Cross-React search
24       32 GKKEIASVA       1.049       Click here for PD Search       Click here for Cross-React search
78       86 PIPGIETDG       1.033       Click here for PD Search       Click here for Cross-React search
80       88 PGIETDGCK       1.022       Click here for PD Search       Click here for Cross-React search
103       111 NYSVNVPSV       0.99       Click here for PD Search       Click here for Cross-React search
120       128 KLLATGEHG       0.984       Click here for PD Search       Click here for Cross-React search
113       121 PNIKTVVKL       0.983       Click here for PD Search       Click here for Cross-React search
45       53 KSKPVHVIA       0.946       Click here for PD Search       Click here for Cross-React search
112       120 VPNIKTVVK       0.885       Click here for PD Search       Click here for Cross-React search
67       75 KVTGQLNGL       0.855       Click here for PD Search       Click here for Cross-React search
46       54 SKPVHVIAE       0.819       Click here for PD Search       Click here for Cross-React search
76       84 EVPIPGIET       0.803       Click here for PD Search       Click here for Cross-React search
70       78 GQLNGLEVP       0.793       Click here for PD Search       Click here for Cross-React search
25       33 KKEIASVAV       0.787       Click here for PD Search       Click here for Cross-React search
77       85 VPIPGIETD       0.775       Click here for PD Search       Click here for Cross-React search
66       74 VKVTGQLNG       0.769       Click here for PD Search       Click here for Cross-React search
60       68 DTCKIEVKV       0.743       Click here for PD Search       Click here for Cross-React search
69       77 TGQLNGLEV       0.74       Click here for PD Search       Click here for Cross-React search
68       76 VTGQLNGLE       0.74       Click here for PD Search       Click here for Cross-React search
119       127 VKLLATGEH       0.738       Click here for PD Search       Click here for Cross-React search
89       97 VLKCPLKKG       0.712       Click here for PD Search       Click here for Cross-React search
13       21 AAAGQVKFT       0.705       Click here for PD Search       Click here for Cross-React search
51       59 VIAEFTANQ       0.688       Click here for PD Search       Click here for Cross-React search
116       124 KTVVKLLAT       0.678       Click here for PD Search       Click here for Cross-React search
26       34 KEIASVAVD       0.657       Click here for PD Search       Click here for Cross-React search
61       69 TCKIEVKVT       0.642       Click here for PD Search       Click here for Cross-React search
108       116 VPSVVPNIK       0.635       Click here for PD Search       Click here for Cross-React search
15       23 AGQVKFTDC       0.618       Click here for PD Search       Click here for Cross-React search
16       24 GQVKFTDCG       0.606       Click here for PD Search       Click here for Cross-React search
39       47 DLCVIHKSK       0.603       Click here for PD Search       Click here for Cross-React search
73       81 NGLEVPIPG       0.602       Click here for PD Search       Click here for Cross-React search
110       118 SVVPNIKTV       0.593       Click here for PD Search       Click here for Cross-React search
64       72 IEVKVTGQL       0.587       Click here for PD Search       Click here for Cross-React search
71       79 QLNGLEVPI       0.562       Click here for PD Search       Click here for Cross-React search
40       48 LCVIHKSKP       0.558       Click here for PD Search       Click here for Cross-React search
23       31 CGKKEIASV       0.557       Click here for PD Search       Click here for Cross-React search
50       58 HVIAEFTAN       0.541       Click here for PD Search       Click here for Cross-React search
106       114 VNVPSVVPN       0.541       Click here for PD Search       Click here for Cross-React search
47       55 KPVHVIAEF       0.529       Click here for PD Search       Click here for Cross-React search
114       122 NIKTVVKLL       0.524       Click here for PD Search       Click here for Cross-React search
107       115 NVPSVVPNI       0.511       Click here for PD Search       Click here for Cross-React search
72       80 LNGLEVPIP       0.502       Click here for PD Search       Click here for Cross-React search
41       49 CVIHKSKPV       0.502       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/


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