List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MKFLVNVALVFMVVYISYIYAAPEPEPAPEPEAEADAEADPEAGIGAVLKVLTTGLPALI
SWIKRKRQQG

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
24       32 EPEPAPEPE       5.238       Click here for PD Search       Click here for Cross-React search
23       31 PEPEPAPEP       4.677       Click here for PD Search       Click here for Cross-React search
61       69 SWIKRKRQQ       4.583       Click here for PD Search       Click here for Cross-React search
26       34 EPAPEPEAE       3.422       Click here for PD Search       Click here for Cross-React search
62       70 WIKRKRQQG       3.384       Click here for PD Search       Click here for Cross-React search
25       33 PEPAPEPEA       3.055       Click here for PD Search       Click here for Cross-React search
22       30 APEPEPAPE       3.055       Click here for PD Search       Click here for Cross-React search
30       38 EPEAEADAE       2.415       Click here for PD Search       Click here for Cross-React search
34       42 EADAEADPE       2.328       Click here for PD Search       Click here for Cross-React search
29       37 PEPEAEADA       2.156       Click here for PD Search       Click here for Cross-React search
28       36 APEPEAEAD       2.156       Click here for PD Search       Click here for Cross-React search
27       35 PAPEPEAEA       1.996       Click here for PD Search       Click here for Cross-React search
60       68 ISWIKRKRQ       1.855       Click here for PD Search       Click here for Cross-React search
20       28 YAAPEPEPA       1.806       Click here for PD Search       Click here for Cross-React search
21       29 AAPEPEPAP       1.782       Click here for PD Search       Click here for Cross-React search
32       40 EAEADAEAD       1.521       Click here for PD Search       Click here for Cross-React search
31       39 PEAEADAEA       1.409       Click here for PD Search       Click here for Cross-React search
35       43 ADAEADPEA       1.358       Click here for PD Search       Click here for Cross-React search
33       41 AEADAEADP       1.358       Click here for PD Search       Click here for Cross-React search
36       44 DAEADPEAG       1.331       Click here for PD Search       Click here for Cross-React search
18       26 YIYAAPEPE       1.27       Click here for PD Search       Click here for Cross-React search
19       27 IYAAPEPEP       1.253       Click here for PD Search       Click here for Cross-React search
17       25 SYIYAAPEP       0.983       Click here for PD Search       Click here for Cross-React search
59       67 LISWIKRKR       0.883       Click here for PD Search       Click here for Cross-React search
37       45 AEADPEAGI       0.558       Click here for PD Search       Click here for Cross-React search
38       46 EADPEAGIG       0.547       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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