List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MKKVCCVLLCVVVAVAVLLSEAPLVAEAVTCNYTELSPCLAAIVSPAKPSATCCQKLREQ
KPCLCVYYKNPNLKQYINSPGAKKVASSCGVSLPKC

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
68       76 YKNPNLKQY       9.013       Click here for PD Search       Click here for Cross-React search
67       75 YYKNPNLKQ       9.013       Click here for PD Search       Click here for Cross-React search
55       63 QKLREQKPC       4.47       Click here for PD Search       Click here for Cross-React search
54       62 CQKLREQKP       4.47       Click here for PD Search       Click here for Cross-React search
69       77 KNPNLKQYI       4.032       Click here for PD Search       Click here for Cross-React search
66       74 VYYKNPNLK       3.863       Click here for PD Search       Click here for Cross-React search
70       78 NPNLKQYIN       3.242       Click here for PD Search       Click here for Cross-React search
72       80 NLKQYINSP       2.702       Click here for PD Search       Click here for Cross-React search
71       79 PNLKQYINS       2.702       Click here for PD Search       Click here for Cross-React search
76       84 YINSPGAKK       2.352       Click here for PD Search       Click here for Cross-React search
56       64 KLREQKPCL       2.129       Click here for PD Search       Click here for Cross-React search
75       83 QYINSPGAK       2.037       Click here for PD Search       Click here for Cross-React search
74       82 KQYINSPGA       2.037       Click here for PD Search       Click here for Cross-React search
73       81 LKQYINSPG       1.663       Click here for PD Search       Click here for Cross-React search
78       86 NSPGAKKVA       1.606       Click here for PD Search       Click here for Cross-React search
53       61 CCQKLREQK       1.55       Click here for PD Search       Click here for Cross-React search
44       52 VSPAKPSAT       1.509       Click here for PD Search       Click here for Cross-React search
80       88 PGAKKVASS       1.338       Click here for PD Search       Click here for Cross-React search
79       87 SPGAKKVAS       1.338       Click here for PD Search       Click here for Cross-React search
30       38 TCNYTELSP       1.338       Click here for PD Search       Click here for Cross-React search
52       60 TCCQKLREQ       1.118       Click here for PD Search       Click here for Cross-React search
77       85 INSPGAKKV       1.114       Click here for PD Search       Click here for Cross-React search
45       53 SPAKPSATC       1.09       Click here for PD Search       Click here for Cross-React search
65       73 CVYYKNPNL       1.035       Click here for PD Search       Click here for Cross-React search
64       72 LCVYYKNPN       1.035       Click here for PD Search       Click here for Cross-React search
27       35 EAVTCNYTE       1.017       Click here for PD Search       Click here for Cross-React search
48       56 KPSATCCQK       0.966       Click here for PD Search       Click here for Cross-React search
32       40 NYTELSPCL       0.765       Click here for PD Search       Click here for Cross-React search
43       51 IVSPAKPSA       0.733       Click here for PD Search       Click here for Cross-React search
42       50 AIVSPAKPS       0.733       Click here for PD Search       Click here for Cross-React search
51       59 ATCCQKLRE       0.652       Click here for PD Search       Click here for Cross-React search
29       37 VTCNYTELS       0.642       Click here for PD Search       Click here for Cross-React search
20       28 SEAPLVAEA       0.63       Click here for PD Search       Click here for Cross-React search
26       34 AEAVTCNYT       0.593       Click here for PD Search       Click here for Cross-React search
57       65 LREQKPCLC       0.571       Click here for PD Search       Click here for Cross-React search
41       49 AAIVSPAKP       0.552       Click here for PD Search       Click here for Cross-React search
19       27 LSEAPLVAE       0.515       Click here for PD Search       Click here for Cross-React search
58       66 REQKPCLCV       0.514       Click here for PD Search       Click here for Cross-React search
50       58 SATCCQKLR       0.505       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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