List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MKLSCLLLTLAIIFVLTIVHAPNVEAKALADPESDAVGFADAVGEADPIDWKKVDWKKVS
KKTCKVMLKACKFLG

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
55       63 DWKKVSKKT       5.757       Click here for PD Search       Click here for Cross-React search
50       58 DWKKVDWKK       5.227       Click here for PD Search       Click here for Cross-React search
57       65 KKVSKKTCK       3.515       Click here for PD Search       Click here for Cross-React search
45       53 EADPIDWKK       3.176       Click here for PD Search       Click here for Cross-React search
54       62 VDWKKVSKK       2.961       Click here for PD Search       Click here for Cross-React search
53       61 KVDWKKVSK       2.961       Click here for PD Search       Click here for Cross-React search
52       60 KKVDWKKVS       2.961       Click here for PD Search       Click here for Cross-React search
27       35 KALADPESD       2.405       Click here for PD Search       Click here for Cross-React search
51       59 WKKVDWKKV       2.323       Click here for PD Search       Click here for Cross-React search
47       55 DPIDWKKVD       2.25       Click here for PD Search       Click here for Cross-React search
25       33 EAKALADPE       1.881       Click here for PD Search       Click here for Cross-React search
56       64 WKKVSKKTC       1.848       Click here for PD Search       Click here for Cross-React search
49       57 IDWKKVDWK       1.832       Click here for PD Search       Click here for Cross-React search
44       52 GEADPIDWK       1.572       Click here for PD Search       Click here for Cross-React search
26       34 AKALADPES       1.455       Click here for PD Search       Click here for Cross-React search
48       56 PIDWKKVDW       1.417       Click here for PD Search       Click here for Cross-React search
46       54 ADPIDWKKV       1.361       Click here for PD Search       Click here for Cross-React search
58       66 KVSKKTCKV       1.304       Click here for PD Search       Click here for Cross-React search
20       28 HAPNVEAKA       1.281       Click here for PD Search       Click here for Cross-React search
28       36 ALADPESDA       1.215       Click here for PD Search       Click here for Cross-React search
30       38 ADPESDAVG       1.071       Click here for PD Search       Click here for Cross-React search
61       69 KKTCKVMLK       1.07       Click here for PD Search       Click here for Cross-React search
19       27 VHAPNVEAK       0.941       Click here for PD Search       Click here for Cross-React search
31       39 DPESDAVGF       0.918       Click here for PD Search       Click here for Cross-React search
29       37 LADPESDAV       0.893       Click here for PD Search       Click here for Cross-React search
23       31 NVEAKALAD       0.838       Click here for PD Search       Click here for Cross-React search
40       48 ADAVGEADP       0.808       Click here for PD Search       Click here for Cross-React search
24       32 VEAKALADP       0.806       Click here for PD Search       Click here for Cross-React search
22       30 PNVEAKALA       0.776       Click here for PD Search       Click here for Cross-React search
21       29 APNVEAKAL       0.776       Click here for PD Search       Click here for Cross-React search
60       68 SKKTCKVML       0.717       Click here for PD Search       Click here for Cross-React search
59       67 VSKKTCKVM       0.646       Click here for PD Search       Click here for Cross-React search
33       41 ESDAVGFAD       0.6       Click here for PD Search       Click here for Cross-React search
43       51 VGEADPIDW       0.583       Click here for PD Search       Click here for Cross-React search
42       50 AVGEADPID       0.56       Click here for PD Search       Click here for Cross-React search
41       49 DAVGEADPI       0.56       Click here for PD Search       Click here for Cross-React search
32       40 PESDAVGFA       0.555       Click here for PD Search       Click here for Cross-React search
62       70 KTCKVMLKA       0.541       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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