List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MKVVAAYLLAVLGGNTTPSAEDLKDILGSVGAETDDDRIQLLLSEVKGKDITELIASGRE
KLASVPSGGGAVAVAAPGAGAGAAAPAAAEPKKEEKVEEKEDTDDDMGFSLFD

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
98       106 EEKEDTDDD       7.865       Click here for PD Search       Click here for Cross-React search
92       100 KKEEKVEEK       7.204       Click here for PD Search       Click here for Cross-React search
93       101 KEEKVEEKE       6.238       Click here for PD Search       Click here for Cross-React search
91       99 PKKEEKVEE       5.57       Click here for PD Search       Click here for Cross-React search
90       98 EPKKEEKVE       5.57       Click here for PD Search       Click here for Cross-React search
94       102 EEKVEEKED       5.209       Click here for PD Search       Click here for Cross-React search
99       107 EKEDTDDDM       4.494       Click here for PD Search       Click here for Cross-React search
88       96 AAEPKKEEK       4.423       Click here for PD Search       Click here for Cross-React search
95       103 EKVEEKEDT       4.341       Click here for PD Search       Click here for Cross-React search
96       104 KVEEKEDTD       4.186       Click here for PD Search       Click here for Cross-React search
97       105 VEEKEDTDD       3.496       Click here for PD Search       Click here for Cross-React search
89       97 AEPKKEEKV       3.249       Click here for PD Search       Click here for Cross-React search
100       108 KEDTDDDMG       2.568       Click here for PD Search       Click here for Cross-React search
87       95 AAAEPKKEE       2.234       Click here for PD Search       Click here for Cross-React search
86       94 PAAAEPKKE       1.995       Click here for PD Search       Click here for Cross-React search
32       40 AETDDDRIQ       1.886       Click here for PD Search       Click here for Cross-React search
17       25 TPSAEDLKD       1.623       Click here for PD Search       Click here for Cross-React search
33       41 ETDDDRIQL       1.54       Click here for PD Search       Click here for Cross-React search
16       24 TTPSAEDLK       1.403       Click here for PD Search       Click here for Cross-React search
14       22 GNTTPSAED       1.354       Click here for PD Search       Click here for Cross-React search
85       93 APAAAEPKK       1.164       Click here for PD Search       Click here for Cross-React search
30       38 VGAETDDDR       1.141       Click here for PD Search       Click here for Cross-React search
15       23 NTTPSAEDL       1.128       Click here for PD Search       Click here for Cross-React search
101       109 EDTDDDMGF       1.112       Click here for PD Search       Click here for Cross-React search
31       39 GAETDDDRI       1.078       Click here for PD Search       Click here for Cross-React search
45       53 EVKGKDITE       1.004       Click here for PD Search       Click here for Cross-React search
102       110 DTDDDMGFS       0.86       Click here for PD Search       Click here for Cross-React search
13       21 GGNTTPSAE       0.802       Click here for PD Search       Click here for Cross-React search
18       26 PSAEDLKDI       0.788       Click here for PD Search       Click here for Cross-React search
59       67 REKLASVPS       0.786       Click here for PD Search       Click here for Cross-React search
29       37 SVGAETDDD       0.781       Click here for PD Search       Click here for Cross-React search
44       52 SEVKGKDIT       0.777       Click here for PD Search       Click here for Cross-React search
34       42 TDDDRIQLL       0.733       Click here for PD Search       Click here for Cross-React search
56       64 ASGREKLAS       0.684       Click here for PD Search       Click here for Cross-React search
53       61 ELIASGREK       0.614       Click here for PD Search       Click here for Cross-React search
84       92 AAPAAAEPK       0.588       Click here for PD Search       Click here for Cross-React search
58       66 GREKLASVP       0.58       Click here for PD Search       Click here for Cross-React search
42       50 LLSEVKGKD       0.522       Click here for PD Search       Click here for Cross-React search
57       65 SGREKLASV       0.503       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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