List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MKYLAAFLLLGLAGNSSPSAEDIKTVLSSVGIDADEERLSSLLKELEGKDINELISSGSE
KLASVPSGGAGAASAGGAAAAGGAAEAAPEAERAEEEKEESDDDMGFGLFD

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
95       103 EEEKEESDD       8.966       Click here for PD Search       Click here for Cross-React search
96       104 EEKEESDDD       8.646       Click here for PD Search       Click here for Cross-React search
92       100 ERAEEEKEE       8.221       Click here for PD Search       Click here for Cross-React search
93       101 RAEEEKEES       6.361       Click here for PD Search       Click here for Cross-React search
94       102 AEEEKEESD       5.424       Click here for PD Search       Click here for Cross-React search
97       105 EKEESDDDM       4.94       Click here for PD Search       Click here for Cross-React search
91       99 AERAEEEKE       4.795       Click here for PD Search       Click here for Cross-React search
90       98 EAERAEEEK       4.795       Click here for PD Search       Click here for Cross-React search
89       97 PEAERAEEE       3.708       Click here for PD Search       Click here for Cross-React search
98       106 KEESDDDMG       2.823       Click here for PD Search       Click here for Cross-React search
88       96 APEAERAEE       2.163       Click here for PD Search       Click here for Cross-React search
33       41 DADEERLSS       1.887       Click here for PD Search       Click here for Cross-React search
44       52 KELEGKDIN       1.419       Click here for PD Search       Click here for Cross-React search
14       22 GNSSPSAED       1.332       Click here for PD Search       Click here for Cross-React search
17       25 SPSAEDIKT       1.264       Click here for PD Search       Click here for Cross-React search
87       95 AAPEAERAE       1.262       Click here for PD Search       Click here for Cross-React search
86       94 EAAPEAERA       1.262       Click here for PD Search       Click here for Cross-React search
85       93 AEAAPEAER       1.262       Click here for PD Search       Click here for Cross-React search
45       53 ELEGKDINE       1.229       Click here for PD Search       Click here for Cross-React search
99       107 EESDDDMGF       1.222       Click here for PD Search       Click here for Cross-React search
16       24 SSPSAEDIK       1.174       Click here for PD Search       Click here for Cross-React search
32       40 IDADEERLS       0.987       Click here for PD Search       Click here for Cross-React search
15       23 NSSPSAEDI       0.944       Click here for PD Search       Click here for Cross-React search
34       42 ADEERLSSL       0.932       Click here for PD Search       Click here for Cross-React search
37       45 ERLSSLLKE       0.911       Click here for PD Search       Click here for Cross-React search
36       44 EERLSSLLK       0.911       Click here for PD Search       Click here for Cross-React search
42       50 LLKELEGKD       0.856       Click here for PD Search       Click here for Cross-React search
13       21 AGNSSPSAE       0.806       Click here for PD Search       Click here for Cross-React search
35       43 DEERLSSLL       0.761       Click here for PD Search       Click here for Cross-React search
31       39 GIDADEERL       0.729       Click here for PD Search       Click here for Cross-React search
43       51 LKELEGKDI       0.728       Click here for PD Search       Click here for Cross-React search
56       64 SSGSEKLAS       0.709       Click here for PD Search       Click here for Cross-React search
18       26 PSAEDIKTV       0.7       Click here for PD Search       Click here for Cross-React search
100       108 ESDDDMGFG       0.698       Click here for PD Search       Click here for Cross-React search
41       49 SLLKELEGK       0.687       Click here for PD Search       Click here for Cross-React search
30       38 VGIDADEER       0.656       Click here for PD Search       Click here for Cross-React search
84       92 AAEAAPEAE       0.651       Click here for PD Search       Click here for Cross-React search
53       61 ELISSGSEK       0.636       Click here for PD Search       Click here for Cross-React search
59       67 SEKLASVPS       0.614       Click here for PD Search       Click here for Cross-React search
46       54 LEGKDINEL       0.585       Click here for PD Search       Click here for Cross-React search
49       57 KDINELISS       0.521       Click here for PD Search       Click here for Cross-React search
52       60 NELISSGSE       0.511       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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