List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MMKSQAALLGLTTLAILFFSGAHAAKITFTNKCSYTVWPGTLTGDQKPQLSLTGFELATG
ISNSVDAPSPWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAVPPATLVEITIA
ENGGQDFYDVSLVDGFNLPMSVAPQGGTGECKASTCPADINKVCPAELQVKGSDGSVIAC
KSACLALNQPQYCCTPPNDKPETCPPTDYSKLFKTQCPQAYSYAYDDKSSTFTCSGRPDY
LITFCP


Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
195       203 TPPNDKPET       10.372       Click here for PD Search       Click here for Cross-React search
221       229 YSYAYDDKS       5.637       Click here for PD Search       Click here for Cross-React search
223       231 YAYDDKSST       5.192       Click here for PD Search       Click here for Cross-React search
222       230 SYAYDDKSS       4.821       Click here for PD Search       Click here for Cross-React search
220       228 AYSYAYDDK       4.249       Click here for PD Search       Click here for Cross-React search
225       233 YDDKSSTFT       4.099       Click here for PD Search       Click here for Cross-React search
198       206 NDKPETCPP       3.852       Click here for PD Search       Click here for Cross-React search
197       205 PNDKPETCP       3.852       Click here for PD Search       Click here for Cross-React search
196       204 PPNDKPETC       3.852       Click here for PD Search       Click here for Cross-React search
194       202 CTPPNDKPE       3.852       Click here for PD Search       Click here for Cross-React search
41       49 TLTGDQKPQ       3.813       Click here for PD Search       Click here for Cross-React search
219       227 QAYSYAYDD       3.68       Click here for PD Search       Click here for Cross-React search
208       216 DYSKLFKTQ       3.625       Click here for PD Search       Click here for Cross-React search
43       51 TGDQKPQLS       3.54       Click here for PD Search       Click here for Cross-React search
200       208 KPETCPPTD       3.457       Click here for PD Search       Click here for Cross-React search
199       207 DKPETCPPT       3.457       Click here for PD Search       Click here for Cross-React search
218       226 PQAYSYAYD       3.407       Click here for PD Search       Click here for Cross-React search
206       214 PTDYSKLFK       3.236       Click here for PD Search       Click here for Cross-React search
207       215 TDYSKLFKT       3.021       Click here for PD Search       Click here for Cross-React search
45       53 DQKPQLSLT       2.95       Click here for PD Search       Click here for Cross-React search
224       232 AYDDKSSTF       2.869       Click here for PD Search       Click here for Cross-React search
203       211 TCPPTDYSK       2.711       Click here for PD Search       Click here for Cross-React search
201       209 PETCPPTDY       2.709       Click here for PD Search       Click here for Cross-React search
121       129 ENGGQDFYD       2.588       Click here for PD Search       Click here for Cross-React search
205       213 PPTDYSKLF       2.502       Click here for PD Search       Click here for Cross-React search
202       210 ETCPPTDYS       2.348       Click here for PD Search       Click here for Cross-React search
214       222 KTQCPQAYS       2.204       Click here for PD Search       Click here for Cross-React search
42       50 LTGDQKPQL       2.179       Click here for PD Search       Click here for Cross-React search
40       48 GTLTGDQKP       2.179       Click here for PD Search       Click here for Cross-React search
39       47 PGTLTGDQK       2.179       Click here for PD Search       Click here for Cross-React search
66       74 DAPSPWSGR       2.138       Click here for PD Search       Click here for Cross-React search
44       52 GDQKPQLSL       2.023       Click here for PD Search       Click here for Cross-React search
78       86 RTRCSTDAS       1.879       Click here for PD Search       Click here for Cross-React search
46       54 QKPQLSLTG       1.748       Click here for PD Search       Click here for Cross-React search
215       223 TQCPQAYSY       1.727       Click here for PD Search       Click here for Cross-React search
62       70 SNSVDAPSP       1.678       Click here for PD Search       Click here for Cross-React search
82       90 STDASGKFT       1.566       Click here for PD Search       Click here for Cross-React search
120       128 AENGGQDFY       1.566       Click here for PD Search       Click here for Cross-React search
204       212 CPPTDYSKL       1.549       Click here for PD Search       Click here for Cross-React search
72       80 SGRFFGRTR       1.545       Click here for PD Search       Click here for Cross-React search
211       219 KLFKTQCPQ       1.484       Click here for PD Search       Click here for Cross-React search
213       221 FKTQCPQAY       1.424       Click here for PD Search       Click here for Cross-React search
226       234 DDKSSTFTC       1.402       Click here for PD Search       Click here for Cross-React search
77       85 GRTRCSTDA       1.388       Click here for PD Search       Click here for Cross-React search
28       36 TFTNKCSYT       1.364       Click here for PD Search       Click here for Cross-React search
63       71 NSVDAPSPW       1.317       Click here for PD Search       Click here for Cross-React search
80       88 RCSTDASGK       1.316       Click here for PD Search       Click here for Cross-React search
235       243 SGRPDYLIT       1.27       Click here for PD Search       Click here for Cross-React search
216       224 QCPQAYSYA       1.209       Click here for PD Search       Click here for Cross-React search
192       200 YCCTPPNDK       1.208       Click here for PD Search       Click here for Cross-React search
24       32 AAKITFTNK       1.202       Click here for PD Search       Click here for Cross-React search
193       201 CCTPPNDKP       1.192       Click here for PD Search       Click here for Cross-React search
166       174 AELQVKGSD       1.19       Click here for PD Search       Click here for Cross-React search
76       84 FGRTRCSTD       1.189       Click here for PD Search       Click here for Cross-React search
118       126 TIAENGGQD       1.167       Click here for PD Search       Click here for Cross-React search
167       175 ELQVKGSDG       1.165       Click here for PD Search       Click here for Cross-React search
209       217 YSKLFKTQC       1.164       Click here for PD Search       Click here for Cross-React search
210       218 SKLFKTQCP       1.148       Click here for PD Search       Click here for Cross-React search
38       46 WPGTLTGDQ       1.145       Click here for PD Search       Click here for Cross-React search
227       235 DKSSTFTCS       1.125       Click here for PD Search       Click here for Cross-React search
67       75 APSPWSGRF       1.109       Click here for PD Search       Click here for Cross-React search
122       130 NGGQDFYDV       1.109       Click here for PD Search       Click here for Cross-React search
165       173 PAELQVKGS       1.101       Click here for PD Search       Click here for Cross-React search
64       72 SVDAPSPWS       1.097       Click here for PD Search       Click here for Cross-React search
217       225 CPQAYSYAY       1.094       Click here for PD Search       Click here for Cross-React search
188       196 NQPQYCCTP       1.085       Click here for PD Search       Click here for Cross-React search
191       199 QYCCTPPND       1.046       Click here for PD Search       Click here for Cross-React search
189       197 QPQYCCTPP       1.043       Click here for PD Search       Click here for Cross-React search
232       240 FTCSGRPDY       1.02       Click here for PD Search       Click here for Cross-React search
144       152 PQGGTGECK       1.007       Click here for PD Search       Click here for Cross-React search
233       241 TCSGRPDYL       0.971       Click here for PD Search       Click here for Cross-React search
190       198 PQYCCTPPN       0.969       Click here for PD Search       Click here for Cross-React search
68       76 PSPWSGRFF       0.95       Click here for PD Search       Click here for Cross-React search
79       87 TRCSTDASG       0.949       Click here for PD Search       Click here for Cross-React search
231       239 TFTCSGRPD       0.939       Click here for PD Search       Click here for Cross-React search
123       131 GGQDFYDVS       0.924       Click here for PD Search       Click here for Cross-React search
31       39 NKCSYTVWP       0.913       Click here for PD Search       Click here for Cross-React search
168       176 LQVKGSDGS       0.902       Click here for PD Search       Click here for Cross-React search
70       78 PWSGRFFGR       0.889       Click here for PD Search       Click here for Cross-React search
154       162 STCPADINK       0.883       Click here for PD Search       Click here for Cross-React search
47       55 KPQLSLTGF       0.874       Click here for PD Search       Click here for Cross-React search
30       38 TNKCSYTVW       0.852       Click here for PD Search       Click here for Cross-React search
26       34 KITFTNKCS       0.846       Click here for PD Search       Click here for Cross-React search
74       82 RFFGRTRCS       0.837       Click here for PD Search       Click here for Cross-React search
71       79 WSGRFFGRT       0.83       Click here for PD Search       Click here for Cross-React search
236       244 GRPDYLITF       0.82       Click here for PD Search       Click here for Cross-React search
23       31 HAAKITFTN       0.818       Click here for PD Search       Click here for Cross-React search
169       177 QVKGSDGSV       0.812       Click here for PD Search       Click here for Cross-React search
65       73 VDAPSPWSG       0.81       Click here for PD Search       Click here for Cross-React search
137       145 NLPMSVAPQ       0.791       Click here for PD Search       Click here for Cross-React search
124       132 GQDFYDVSL       0.77       Click here for PD Search       Click here for Cross-React search
61       69 ISNSVDAPS       0.761       Click here for PD Search       Click here for Cross-React search
48       56 PQLSLTGFE       0.757       Click here for PD Search       Click here for Cross-React search
230       238 STFTCSGRP       0.754       Click here for PD Search       Click here for Cross-React search
212       220 LFKTQCPQA       0.75       Click here for PD Search       Click here for Cross-React search
147       155 GTGECKAST       0.742       Click here for PD Search       Click here for Cross-React search
161       169 NKVCPAELQ       0.716       Click here for PD Search       Click here for Cross-React search
142       150 VAPQGGTGE       0.704       Click here for PD Search       Click here for Cross-React search
29       37 FTNKCSYTV       0.702       Click here for PD Search       Click here for Cross-React search
119       127 IAENGGQDF       0.7       Click here for PD Search       Click here for Cross-React search
35       43 YTVWPGTLT       0.672       Click here for PD Search       Click here for Cross-React search
228       236 KSSTFTCSG       0.667       Click here for PD Search       Click here for Cross-React search
104       112 NGNGAVPPA       0.664       Click here for PD Search       Click here for Cross-React search
27       35 ITFTNKCSY       0.663       Click here for PD Search       Click here for Cross-React search
145       153 QGGTGECKA       0.658       Click here for PD Search       Click here for Cross-React search
229       237 SSTFTCSGR       0.653       Click here for PD Search       Click here for Cross-React search
25       33 AKITFTNKC       0.638       Click here for PD Search       Click here for Cross-React search
83       91 TDASGKFTC       0.626       Click here for PD Search       Click here for Cross-React search
34       42 SYTVWPGTL       0.624       Click here for PD Search       Click here for Cross-React search
185       193 LALNQPQYC       0.623       Click here for PD Search       Click here for Cross-React search
184       192 CLALNQPQY       0.623       Click here for PD Search       Click here for Cross-React search
73       81 GRFFGRTRC       0.618       Click here for PD Search       Click here for Cross-React search
75       83 FFGRTRCST       0.617       Click here for PD Search       Click here for Cross-React search
69       77 SPWSGRFFG       0.608       Click here for PD Search       Click here for Cross-React search
56       64 ELATGISNS       0.604       Click here for PD Search       Click here for Cross-React search
105       113 GNGAVPPAT       0.596       Click here for PD Search       Click here for Cross-React search
159       167 DINKVCPAE       0.587       Click here for PD Search       Click here for Cross-React search
139       147 PMSVAPQGG       0.584       Click here for PD Search       Click here for Cross-React search
81       89 CSTDASGKF       0.582       Click here for PD Search       Click here for Cross-React search
187       195 LNQPQYCCT       0.579       Click here for PD Search       Click here for Cross-React search
125       133 QDFYDVSLV       0.578       Click here for PD Search       Click here for Cross-React search
60       68 GISNSVDAP       0.562       Click here for PD Search       Click here for Cross-React search
32       40 KCSYTVWPG       0.562       Click here for PD Search       Click here for Cross-React search
126       134 DFYDVSLVD       0.557       Click here for PD Search       Click here for Cross-React search
152       160 KASTCPADI       0.555       Click here for PD Search       Click here for Cross-React search
20       28 SGAHAAKIT       0.545       Click here for PD Search       Click here for Cross-React search
141       149 SVAPQGGTG       0.545       Click here for PD Search       Click here for Cross-React search
140       148 MSVAPQGGT       0.545       Click here for PD Search       Click here for Cross-React search
110       118 PPATLVEIT       0.541       Click here for PD Search       Click here for Cross-React search
59       67 TGISNSVDA       0.524       Click here for PD Search       Click here for Cross-React search
58       66 ATGISNSVD       0.524       Click here for PD Search       Click here for Cross-React search
157       165 PADINKVCP       0.524       Click here for PD Search       Click here for Cross-React search
22       30 AHAAKITFT       0.514       Click here for PD Search       Click here for Cross-React search
146       154 GGTGECKAS       0.509       Click here for PD Search       Click here for Cross-React search
143       151 APQGGTGEC       0.509       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/


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