List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MNSLLSSIIIVVFSVWLSVIFAVNVKPKPNQDDYCNLNCTNGPNVGCTKPDVPRDCQNFK
LVNITERMKKAFLNAHNRKRRLVAAGKGLLKDGVHTPIAAKMPNLTWNIALAKLAEYNVK
QCEMKHDCAKTRHGHTGQNLFFYGTTLSPIKNSTIAKMAVDGWYAESKDTRLEDIKKLTT
IYPNGKPIGHYTQLIWGNTTKVGCAVSTYKKHSNGNMFNMTLVACNYRGGNMLEEAVYQI
KDAKNPKSKNQTKNNKKPKQKMPK

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
253       261 KNNKKPKQK       13.104       Click here for PD Search       Click here for Cross-React search
249       257 KNQTKNNKK       9.835       Click here for PD Search       Click here for Cross-React search
252       260 TKNNKKPKQ       9.456       Click here for PD Search       Click here for Cross-React search
251       259 QTKNNKKPK       9.456       Click here for PD Search       Click here for Cross-React search
256       264 KKPKQKMPK       7.754       Click here for PD Search       Click here for Cross-React search
250       258 NQTKNNKKP       7.604       Click here for PD Search       Click here for Cross-React search
26       34 KPKPNQDDY       6.884       Click here for PD Search       Click here for Cross-React search
248       256 SKNQTKNNK       6.59       Click here for PD Search       Click here for Cross-React search
247       255 KSKNQTKNN       6.59       Click here for PD Search       Click here for Cross-React search
254       262 NNKKPKQKM       6.484       Click here for PD Search       Click here for Cross-React search
246       254 PKSKNQTKN       6.337       Click here for PD Search       Click here for Cross-React search
245       253 NPKSKNQTK       6.337       Click here for PD Search       Click here for Cross-React search
244       252 KNPKSKNQT       6.337       Click here for PD Search       Click here for Cross-React search
255       263 NKKPKQKMP       6.235       Click here for PD Search       Click here for Cross-React search
241       249 KDAKNPKSK       5.319       Click here for PD Search       Click here for Cross-React search
243       251 AKNPKSKNQ       4.436       Click here for PD Search       Click here for Cross-React search
242       250 DAKNPKSKN       4.277       Click here for PD Search       Click here for Cross-React search
25       33 VKPKPNQDD       3.261       Click here for PD Search       Click here for Cross-React search
24       32 NVKPKPNQD       3.14       Click here for PD Search       Click here for Cross-React search
166       174 ESKDTRLED       3.091       Click here for PD Search       Click here for Cross-React search
74       82 NAHNRKRRL       2.606       Click here for PD Search       Click here for Cross-React search
73       81 LNAHNRKRR       2.606       Click here for PD Search       Click here for Cross-React search
208       216 TYKKHSNGN       2.497       Click here for PD Search       Click here for Cross-React search
239       247 QIKDAKNPK       2.409       Click here for PD Search       Click here for Cross-React search
163       171 WYAESKDTR       2.157       Click here for PD Search       Click here for Cross-React search
207       215 STYKKHSNG       2.08       Click here for PD Search       Click here for Cross-React search
28       36 KPNQDDYCN       1.919       Click here for PD Search       Click here for Cross-React search
238       246 YQIKDAKNP       1.888       Click here for PD Search       Click here for Cross-React search
165       173 AESKDTRLE       1.87       Click here for PD Search       Click here for Cross-React search
169       177 DTRLEDIKK       1.867       Click here for PD Search       Click here for Cross-React search
168       176 KDTRLEDIK       1.867       Click here for PD Search       Click here for Cross-React search
240       248 IKDAKNPKS       1.864       Click here for PD Search       Click here for Cross-React search
27       35 PKPNQDDYC       1.845       Click here for PD Search       Click here for Cross-React search
209       217 YKKHSNGNM       1.712       Click here for PD Search       Click here for Cross-React search
164       172 YAESKDTRL       1.692       Click here for PD Search       Click here for Cross-React search
206       214 VSTYKKHSN       1.56       Click here for PD Search       Click here for Cross-React search
130       138 KTRHGHTGQ       1.515       Click here for PD Search       Click here for Cross-React search
23       31 VNVKPKPNQ       1.396       Click here for PD Search       Click here for Cross-React search
63       71 NITERMKKA       1.305       Click here for PD Search       Click here for Cross-React search
161       169 DGWYAESKD       1.261       Click here for PD Search       Click here for Cross-React search
167       175 SKDTRLEDI       1.251       Click here for PD Search       Click here for Cross-React search
131       139 TRHGHTGQN       1.219       Click here for PD Search       Click here for Cross-React search
76       84 HNRKRRLVA       1.203       Click here for PD Search       Click here for Cross-React search
75       83 AHNRKRRLV       1.203       Click here for PD Search       Click here for Cross-React search
72       80 FLNAHNRKR       1.152       Click here for PD Search       Click here for Cross-React search
125       133 KHDCAKTRH       1.12       Click here for PD Search       Click here for Cross-React search
176       184 KKLTTIYPN       1.11       Click here for PD Search       Click here for Cross-React search
113       121 KLAEYNVKQ       1.106       Click here for PD Search       Click here for Cross-React search
162       170 GWYAESKDT       1.09       Click here for PD Search       Click here for Cross-React search
49       57 KPDVPRDCQ       1.065       Click here for PD Search       Click here for Cross-React search
179       187 TTIYPNGKP       1.03       Click here for PD Search       Click here for Cross-React search
205       213 AVSTYKKHS       0.98       Click here for PD Search       Click here for Cross-React search
62       70 VNITERMKK       0.959       Click here for PD Search       Click here for Cross-React search
210       218 KKHSNGNMF       0.946       Click here for PD Search       Click here for Cross-React search
171       179 RLEDIKKLT       0.922       Click here for PD Search       Click here for Cross-React search
170       178 TRLEDIKKL       0.922       Click here for PD Search       Click here for Cross-React search
66       74 ERMKKAFLN       0.921       Click here for PD Search       Click here for Cross-React search
237       245 VYQIKDAKN       0.906       Click here for PD Search       Click here for Cross-React search
77       85 NRKRRLVAA       0.893       Click here for PD Search       Click here for Cross-React search
48       56 TKPDVPRDC       0.887       Click here for PD Search       Click here for Cross-React search
47       55 CTKPDVPRD       0.887       Click here for PD Search       Click here for Cross-React search
129       137 AKTRHGHTG       0.884       Click here for PD Search       Click here for Cross-React search
50       58 PDVPRDCQN       0.856       Click here for PD Search       Click here for Cross-React search
234       242 EEAVYQIKD       0.845       Click here for PD Search       Click here for Cross-React search
65       73 TERMKKAFL       0.827       Click here for PD Search       Click here for Cross-React search
30       38 NQDDYCNLN       0.823       Click here for PD Search       Click here for Cross-React search
22       30 AVNVKPKPN       0.814       Click here for PD Search       Click here for Cross-React search
124       132 MKHDCAKTR       0.814       Click here for PD Search       Click here for Cross-React search
29       37 PNQDDYCNL       0.791       Click here for PD Search       Click here for Cross-React search
211       219 KHSNGNMFN       0.761       Click here for PD Search       Click here for Cross-React search
123       131 EMKHDCAKT       0.72       Click here for PD Search       Click here for Cross-React search
117       125 YNVKQCEMK       0.704       Click here for PD Search       Click here for Cross-React search
64       72 ITERMKKAF       0.703       Click here for PD Search       Click here for Cross-React search
227       235 YRGGNMLEE       0.7       Click here for PD Search       Click here for Cross-React search
132       140 RHGHTGQNL       0.696       Click here for PD Search       Click here for Cross-React search
172       180 LEDIKKLTT       0.679       Click here for PD Search       Click here for Cross-React search
185       193 GKPIGHYTQ       0.669       Click here for PD Search       Click here for Cross-React search
183       191 PNGKPIGHY       0.666       Click here for PD Search       Click here for Cross-React search
182       190 YPNGKPIGH       0.666       Click here for PD Search       Click here for Cross-React search
226       234 NYRGGNMLE       0.65       Click here for PD Search       Click here for Cross-React search
112       120 AKLAEYNVK       0.645       Click here for PD Search       Click here for Cross-React search
53       61 PRDCQNFKL       0.638       Click here for PD Search       Click here for Cross-React search
146       154 TLSPIKNST       0.636       Click here for PD Search       Click here for Cross-React search
145       153 TTLSPIKNS       0.636       Click here for PD Search       Click here for Cross-React search
119       127 VKQCEMKHD       0.635       Click here for PD Search       Click here for Cross-React search
115       123 AEYNVKQCE       0.622       Click here for PD Search       Click here for Cross-React search
184       192 NGKPIGHYT       0.621       Click here for PD Search       Click here for Cross-React search
118       126 NVKQCEMKH       0.611       Click here for PD Search       Click here for Cross-React search
116       124 EYNVKQCEM       0.61       Click here for PD Search       Click here for Cross-React search
69       77 KKAFLNAHN       0.607       Click here for PD Search       Click here for Cross-React search
71       79 AFLNAHNRK       0.594       Click here for PD Search       Click here for Cross-React search
70       78 KAFLNAHNR       0.594       Click here for PD Search       Click here for Cross-React search
100       108 AKMPNLTWN       0.592       Click here for PD Search       Click here for Cross-React search
173       181 EDIKKLTTI       0.577       Click here for PD Search       Click here for Cross-React search
52       60 VPRDCQNFK       0.574       Click here for PD Search       Click here for Cross-React search
236       244 AVYQIKDAK       0.569       Click here for PD Search       Click here for Cross-React search
149       157 PIKNSTIAK       0.565       Click here for PD Search       Click here for Cross-React search
79       87 KRRLVAAGK       0.561       Click here for PD Search       Click here for Cross-React search
160       168 VDGWYAESK       0.561       Click here for PD Search       Click here for Cross-React search
186       194 KPIGHYTQL       0.558       Click here for PD Search       Click here for Cross-React search
127       135 DCAKTRHGH       0.554       Click here for PD Search       Click here for Cross-React search
126       134 HDCAKTRHG       0.554       Click here for PD Search       Click here for Cross-React search
78       86 RKRRLVAAG       0.549       Click here for PD Search       Click here for Cross-React search
178       186 LTTIYPNGK       0.549       Click here for PD Search       Click here for Cross-React search
177       185 KLTTIYPNG       0.549       Click here for PD Search       Click here for Cross-React search
67       75 RMKKAFLNA       0.537       Click here for PD Search       Click here for Cross-React search
46       54 GCTKPDVPR       0.526       Click here for PD Search       Click here for Cross-React search
174       182 DIKKLTTIY       0.522       Click here for PD Search       Click here for Cross-React search
151       159 KNSTIAKMA       0.521       Click here for PD Search       Click here for Cross-React search
180       188 TIYPNGKPI       0.5       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

Thanks for using SDAP Database