List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MSWQAYVDDHLLCDIDGQCLTAAAIVGHDGSVWAQSDAFPQCKPEEIAAIMKDFDEPGSL
APTGLYLGGTKYMVIQGEPGAVIRGKKGSGGVTIKKTNLALIIGIYNEPMTPGQCNMVVE
RLGDYLFDQGF

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
106       114 YNEPMTPGQ       5.389       Click here for PD Search       Click here for Cross-React search
51       59 MKDFDEPGS       3.582       Click here for PD Search       Click here for Cross-React search
52       60 KDFDEPGSL       2.985       Click here for PD Search       Click here for Cross-React search
38       46 AFPQCKPEE       2.458       Click here for PD Search       Click here for Cross-React search
37       45 DAFPQCKPE       2.37       Click here for PD Search       Click here for Cross-React search
55       63 DEPGSLAPT       2.327       Click here for PD Search       Click here for Cross-React search
2       10 SWQAYVDDH       2.296       Click here for PD Search       Click here for Cross-React search
105       113 IYNEPMTPG       2.181       Click here for PD Search       Click here for Cross-React search
104       112 GIYNEPMTP       2.181       Click here for PD Search       Click here for Cross-React search
35       43 QSDAFPQCK       2.054       Click here for PD Search       Click here for Cross-React search
33       41 WAQSDAFPQ       2.035       Click here for PD Search       Click here for Cross-React search
40       48 PQCKPEEIA       1.989       Click here for PD Search       Click here for Cross-React search
49       57 AIMKDFDEP       1.912       Click here for PD Search       Click here for Cross-React search
50       58 IMKDFDEPG       1.873       Click here for PD Search       Click here for Cross-React search
108       116 EPMTPGQCN       1.844       Click here for PD Search       Click here for Cross-React search
107       115 NEPMTPGQC       1.844       Click here for PD Search       Click here for Cross-React search
36       44 SDAFPQCKP       1.834       Click here for PD Search       Click here for Cross-React search
121       129 RLGDYLFDQ       1.823       Click here for PD Search       Click here for Cross-React search
120       128 ERLGDYLFD       1.823       Click here for PD Search       Click here for Cross-React search
39       47 FPQCKPEEI       1.705       Click here for PD Search       Click here for Cross-React search
1       9 MSWQAYVDD       1.67       Click here for PD Search       Click here for Cross-React search
84       92 RGKKGSGGV       1.577       Click here for PD Search       Click here for Cross-React search
71       79 KYMVIQGEP       1.563       Click here for PD Search       Click here for Cross-React search
53       61 DFDEPGSLA       1.508       Click here for PD Search       Click here for Cross-React search
83       91 IRGKKGSGG       1.489       Click here for PD Search       Click here for Cross-React search
70       78 TKYMVIQGE       1.458       Click here for PD Search       Click here for Cross-React search
90       98 GGVTIKKTN       1.44       Click here for PD Search       Click here for Cross-React search
29       37 DGSVWAQSD       1.428       Click here for PD Search       Click here for Cross-React search
3       11 WQAYVDDHL       1.413       Click here for PD Search       Click here for Cross-React search
54       62 FDEPGSLAP       1.396       Click here for PD Search       Click here for Cross-React search
56       64 EPGSLAPTG       1.379       Click here for PD Search       Click here for Cross-React search
93       101 TIKKTNLAL       1.361       Click here for PD Search       Click here for Cross-React search
79       87 PGAVIRGKK       1.316       Click here for PD Search       Click here for Cross-React search
41       49 QCKPEEIAA       1.3       Click here for PD Search       Click here for Cross-React search
48       56 AAIMKDFDE       1.249       Click here for PD Search       Click here for Cross-React search
92       100 VTIKKTNLA       1.225       Click here for PD Search       Click here for Cross-React search
91       99 GVTIKKTNL       1.2       Click here for PD Search       Click here for Cross-React search
89       97 SGGVTIKKT       1.2       Click here for PD Search       Click here for Cross-React search
28       36 HDGSVWAQS       1.164       Click here for PD Search       Click here for Cross-React search
85       93 GKKGSGGVT       1.162       Click here for PD Search       Click here for Cross-React search
81       89 AVIRGKKGS       1.14       Click here for PD Search       Click here for Cross-React search
78       86 EPGAVIRGK       1.139       Click here for PD Search       Click here for Cross-React search
82       90 VIRGKKGSG       1.117       Click here for PD Search       Click here for Cross-React search
4       12 QAYVDDHLL       1.108       Click here for PD Search       Click here for Cross-React search
109       117 PMTPGQCNM       1.054       Click here for PD Search       Click here for Cross-React search
45       53 EEIAAIMKD       1.049       Click here for PD Search       Click here for Cross-React search
34       42 AQSDAFPQC       1.037       Click here for PD Search       Click here for Cross-React search
103       111 IGIYNEPMT       0.989       Click here for PD Search       Click here for Cross-React search
76       84 QGEPGAVIR       0.987       Click here for PD Search       Click here for Cross-React search
65       73 LYLGGTKYM       0.986       Click here for PD Search       Click here for Cross-React search
64       72 GLYLGGTKY       0.986       Click here for PD Search       Click here for Cross-React search
44       52 PEEIAAIMK       0.971       Click here for PD Search       Click here for Cross-React search
43       51 KPEEIAAIM       0.971       Click here for PD Search       Click here for Cross-React search
123       131 GDYLFDQGF       0.967       Click here for PD Search       Click here for Cross-React search
122       130 LGDYLFDQG       0.921       Click here for PD Search       Click here for Cross-React search
63       71 TGLYLGGTK       0.908       Click here for PD Search       Click here for Cross-React search
66       74 YLGGTKYMV       0.887       Click here for PD Search       Click here for Cross-React search
32       40 VWAQSDAFP       0.872       Click here for PD Search       Click here for Cross-React search
30       38 GSVWAQSDA       0.864       Click here for PD Search       Click here for Cross-React search
27       35 GHDGSVWAQ       0.859       Click here for PD Search       Click here for Cross-React search
116       124 NMVVERLGD       0.855       Click here for PD Search       Click here for Cross-React search
80       88 GAVIRGKKG       0.842       Click here for PD Search       Click here for Cross-React search
69       77 GTKYMVIQG       0.833       Click here for PD Search       Click here for Cross-React search
68       76 GGTKYMVIQ       0.833       Click here for PD Search       Click here for Cross-React search
117       125 MVVERLGDY       0.833       Click here for PD Search       Click here for Cross-React search
88       96 GSGGVTIKK       0.823       Click here for PD Search       Click here for Cross-React search
87       95 KGSGGVTIK       0.823       Click here for PD Search       Click here for Cross-React search
86       94 KKGSGGVTI       0.823       Click here for PD Search       Click here for Cross-React search
119       127 VERLGDYLF       0.81       Click here for PD Search       Click here for Cross-React search
72       80 YMVIQGEPG       0.773       Click here for PD Search       Click here for Cross-React search
31       39 SVWAQSDAF       0.756       Click here for PD Search       Click here for Cross-React search
62       70 PTGLYLGGT       0.702       Click here for PD Search       Click here for Cross-React search
118       126 VVERLGDYL       0.694       Click here for PD Search       Click here for Cross-React search
58       66 GSLAPTGLY       0.665       Click here for PD Search       Click here for Cross-React search
95       103 KKTNLALII       0.661       Click here for PD Search       Click here for Cross-React search
94       102 IKKTNLALI       0.661       Click here for PD Search       Click here for Cross-React search
57       65 PGSLAPTGL       0.657       Click here for PD Search       Click here for Cross-React search
113       121 GQCNMVVER       0.576       Click here for PD Search       Click here for Cross-React search
8       16 DDHLLCDID       0.571       Click here for PD Search       Click here for Cross-React search
6       14 YVDDHLLCD       0.567       Click here for PD Search       Click here for Cross-React search
77       85 GEPGAVIRG       0.564       Click here for PD Search       Click here for Cross-React search
59       67 SLAPTGLYL       0.554       Click here for PD Search       Click here for Cross-React search
42       50 CKPEEIAAI       0.526       Click here for PD Search       Click here for Cross-React search
46       54 EIAAIMKDF       0.524       Click here for PD Search       Click here for Cross-React search
47       55 IAAIMKDFD       0.506       Click here for PD Search       Click here for Cross-React search
110       118 MTPGQCNMV       0.506       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

Thanks for using SDAP Database