List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MSWQAYVDDHLLCGIEGNHLTHAAIIGQDGSVWLQSTDFPQFKPEEITAIMNDFNEPGSL
APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTGAALIIGIYDEPMTPGQCNMVVE
RLGDYLIDQGY

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
38       46 DFPQFKPEE       5.605       Click here for PD Search       Click here for Cross-React search
106       114 YDEPMTPGQ       4.78       Click here for PD Search       Click here for Cross-React search
37       45 TDFPQFKPE       4.671       Click here for PD Search       Click here for Cross-React search
35       43 QSTDFPQFK       4.048       Click here for PD Search       Click here for Cross-React search
40       48 PQFKPEEIT       3.921       Click here for PD Search       Click here for Cross-React search
36       44 STDFPQFKP       3.615       Click here for PD Search       Click here for Cross-React search
41       49 QFKPEEITA       2.562       Click here for PD Search       Click here for Cross-React search
51       59 MNDFNEPGS       2.369       Click here for PD Search       Click here for Cross-React search
39       47 FPQFKPEEI       2.353       Click here for PD Search       Click here for Cross-React search
33       41 WLQSTDFPQ       2.027       Click here for PD Search       Click here for Cross-React search
52       60 NDFNEPGSL       1.974       Click here for PD Search       Click here for Cross-React search
2       10 SWQAYVDDH       1.961       Click here for PD Search       Click here for Cross-React search
105       113 IYDEPMTPG       1.935       Click here for PD Search       Click here for Cross-React search
104       112 GIYDEPMTP       1.935       Click here for PD Search       Click here for Cross-React search
55       63 NEPGSLAPT       1.914       Click here for PD Search       Click here for Cross-React search
34       42 LQSTDFPQF       1.669       Click here for PD Search       Click here for Cross-React search
107       115 DEPMTPGQC       1.635       Click here for PD Search       Click here for Cross-React search
108       116 EPMTPGQCN       1.575       Click here for PD Search       Click here for Cross-React search
84       92 RGKKGPGGV       1.554       Click here for PD Search       Click here for Cross-React search
83       91 IRGKKGPGG       1.468       Click here for PD Search       Click here for Cross-React search
1       9 MSWQAYVDD       1.426       Click here for PD Search       Click here for Cross-React search
71       79 KYMVIQGEP       1.335       Click here for PD Search       Click here for Cross-React search
49       57 AIMNDFNEP       1.265       Click here for PD Search       Click here for Cross-React search
121       129 RLGDYLIDQ       1.26       Click here for PD Search       Click here for Cross-React search
120       128 ERLGDYLID       1.26       Click here for PD Search       Click here for Cross-React search
89       97 PGGVTVKKT       1.252       Click here for PD Search       Click here for Cross-React search
70       78 TKYMVIQGE       1.246       Click here for PD Search       Click here for Cross-React search
53       61 DFNEPGSLA       1.24       Click here for PD Search       Click here for Cross-React search
50       58 IMNDFNEPG       1.239       Click here for PD Search       Click here for Cross-React search
123       131 GDYLIDQGY       1.21       Click here for PD Search       Click here for Cross-React search
3       11 WQAYVDDHL       1.207       Click here for PD Search       Click here for Cross-React search
43       51 KPEEITAIM       1.185       Click here for PD Search       Click here for Cross-React search
48       56 TAIMNDFNE       1.181       Click here for PD Search       Click here for Cross-React search
56       64 EPGSLAPTG       1.178       Click here for PD Search       Click here for Cross-React search
54       62 FNEPGSLAP       1.148       Click here for PD Search       Click here for Cross-React search
85       93 GKKGPGGVT       1.145       Click here for PD Search       Click here for Cross-React search
81       89 AVIRGKKGP       1.124       Click here for PD Search       Click here for Cross-React search
79       87 PGAVIRGKK       1.124       Click here for PD Search       Click here for Cross-React search
16       24 EGNHLTHAA       1.117       Click here for PD Search       Click here for Cross-React search
82       90 VIRGKKGPG       1.101       Click here for PD Search       Click here for Cross-React search
42       50 FKPEEITAI       1.037       Click here for PD Search       Click here for Cross-React search
28       36 QDGSVWLQS       1.033       Click here for PD Search       Click here for Cross-React search
45       53 EEITAIMND       1.029       Click here for PD Search       Click here for Cross-React search
78       86 EPGAVIRGK       0.973       Click here for PD Search       Click here for Cross-React search
44       52 PEEITAIMN       0.953       Click here for PD Search       Click here for Cross-React search
4       12 QAYVDDHLL       0.946       Click here for PD Search       Click here for Cross-React search
93       101 TVKKTGAAL       0.928       Click here for PD Search       Click here for Cross-React search
109       117 PMTPGQCNM       0.9       Click here for PD Search       Click here for Cross-React search
103       111 IGIYDEPMT       0.877       Click here for PD Search       Click here for Cross-React search
32       40 VWLQSTDFP       0.869       Click here for PD Search       Click here for Cross-React search
30       38 GSVWLQSTD       0.86       Click here for PD Search       Click here for Cross-React search
29       37 DGSVWLQST       0.86       Click here for PD Search       Click here for Cross-React search
88       96 GPGGVTVKK       0.859       Click here for PD Search       Click here for Cross-React search
87       95 KGPGGVTVK       0.859       Click here for PD Search       Click here for Cross-React search
86       94 KKGPGGVTV       0.859       Click here for PD Search       Click here for Cross-React search
76       84 QGEPGAVIR       0.843       Click here for PD Search       Click here for Cross-React search
65       73 LYLGGTKYM       0.842       Click here for PD Search       Click here for Cross-React search
64       72 GLYLGGTKY       0.842       Click here for PD Search       Click here for Cross-React search
92       100 VTVKKTGAA       0.835       Click here for PD Search       Click here for Cross-React search
91       99 GVTVKKTGA       0.818       Click here for PD Search       Click here for Cross-React search
90       98 GGVTVKKTG       0.802       Click here for PD Search       Click here for Cross-React search
63       71 TGLYLGGTK       0.775       Click here for PD Search       Click here for Cross-React search
15       23 IEGNHLTHA       0.775       Click here for PD Search       Click here for Cross-React search
27       35 GQDGSVWLQ       0.763       Click here for PD Search       Click here for Cross-React search
14       22 GIEGNHLTH       0.759       Click here for PD Search       Click here for Cross-React search
66       74 YLGGTKYMV       0.758       Click here for PD Search       Click here for Cross-React search
31       39 SVWLQSTDF       0.753       Click here for PD Search       Click here for Cross-React search
116       124 NMVVERLGD       0.73       Click here for PD Search       Click here for Cross-React search
80       88 GAVIRGKKG       0.719       Click here for PD Search       Click here for Cross-React search
69       77 GTKYMVIQG       0.712       Click here for PD Search       Click here for Cross-React search
68       76 GGTKYMVIQ       0.712       Click here for PD Search       Click here for Cross-React search
117       125 MVVERLGDY       0.712       Click here for PD Search       Click here for Cross-React search
72       80 YMVIQGEPG       0.66       Click here for PD Search       Click here for Cross-React search
122       130 LGDYLIDQG       0.637       Click here for PD Search       Click here for Cross-React search
62       70 PTGLYLGGT       0.6       Click here for PD Search       Click here for Cross-React search
118       126 VVERLGDYL       0.593       Click here for PD Search       Click here for Cross-React search
58       66 GSLAPTGLY       0.568       Click here for PD Search       Click here for Cross-React search
57       65 PGSLAPTGL       0.561       Click here for PD Search       Click here for Cross-React search
119       127 VERLGDYLI       0.56       Click here for PD Search       Click here for Cross-React search
46       54 EITAIMNDF       0.515       Click here for PD Search       Click here for Cross-React search
21       29 THAAIIGQD       0.508       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

Thanks for using SDAP Database