List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MSWQAYVDDHLMCDIDGNRLTAAAILGQDGSVWSQSASFPAFKPEEIAAILKDFDQPGTL
APTGLFLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTSQALLIGIYDEPVTPGQCNIVVE
RLGDYLIEQGL

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
106       114 YDEPVTPGQ       4.181       Click here for PD Search       Click here for Cross-React search
52       60 KDFDQPGTL       3.202       Click here for PD Search       Click here for Cross-React search
51       59 LKDFDQPGT       3.202       Click here for PD Search       Click here for Cross-React search
38       46 SFPAFKPEE       3.06       Click here for PD Search       Click here for Cross-React search
55       63 DQPGTLAPT       2.496       Click here for PD Search       Click here for Cross-React search
93       101 TIKKTSQAL       2.373       Click here for PD Search       Click here for Cross-React search
2       10 SWQAYVDDH       2.287       Click here for PD Search       Click here for Cross-React search
92       100 ITIKKTSQA       2.017       Click here for PD Search       Click here for Cross-React search
91       99 GITIKKTSQ       1.976       Click here for PD Search       Click here for Cross-React search
28       36 QDGSVWSQS       1.957       Click here for PD Search       Click here for Cross-React search
40       48 PAFKPEEIA       1.867       Click here for PD Search       Click here for Cross-React search
37       45 ASFPAFKPE       1.785       Click here for PD Search       Click here for Cross-React search
105       113 IYDEPVTPG       1.692       Click here for PD Search       Click here for Cross-React search
104       112 GIYDEPVTP       1.692       Click here for PD Search       Click here for Cross-React search
1       9 MSWQAYVDD       1.663       Click here for PD Search       Click here for Cross-React search
53       61 DFDQPGTLA       1.617       Click here for PD Search       Click here for Cross-React search
39       47 FPAFKPEEI       1.601       Click here for PD Search       Click here for Cross-React search
49       57 AILKDFDQP       1.588       Click here for PD Search       Click here for Cross-React search
71       79 KYMVIQGEP       1.557       Click here for PD Search       Click here for Cross-React search
50       58 ILKDFDQPG       1.555       Click here for PD Search       Click here for Cross-React search
35       43 QSASFPAFK       1.547       Click here for PD Search       Click here for Cross-React search
14       22 DIDGNRLTA       1.54       Click here for PD Search       Click here for Cross-React search
121       129 RLGDYLIEQ       1.524       Click here for PD Search       Click here for Cross-React search
120       128 ERLGDYLIE       1.524       Click here for PD Search       Click here for Cross-React search
54       62 FDQPGTLAP       1.498       Click here for PD Search       Click here for Cross-React search
84       92 RGKKGSGGI       1.484       Click here for PD Search       Click here for Cross-React search
83       91 IRGKKGSGG       1.484       Click here for PD Search       Click here for Cross-React search
56       64 QPGTLAPTG       1.479       Click here for PD Search       Click here for Cross-React search
70       78 TKYMVIQGE       1.453       Click here for PD Search       Click here for Cross-React search
27       35 GQDGSVWSQ       1.445       Click here for PD Search       Click here for Cross-React search
107       115 DEPVTPGQC       1.43       Click here for PD Search       Click here for Cross-React search
3       11 WQAYVDDHL       1.407       Click here for PD Search       Click here for Cross-React search
36       44 SASFPAFKP       1.381       Click here for PD Search       Click here for Cross-React search
108       116 EPVTPGQCN       1.377       Click here for PD Search       Click here for Cross-React search
95       103 KKTSQALLI       1.356       Click here for PD Search       Click here for Cross-React search
94       102 IKKTSQALL       1.356       Click here for PD Search       Click here for Cross-React search
16       24 DGNRLTAAA       1.343       Click here for PD Search       Click here for Cross-React search
4       12 QAYVDDHLM       1.325       Click here for PD Search       Click here for Cross-React search
79       87 PGAVIRGKK       1.311       Click here for PD Search       Click here for Cross-React search
33       41 WSQSASFPA       1.259       Click here for PD Search       Click here for Cross-React search
41       49 AFKPEEIAA       1.22       Click here for PD Search       Click here for Cross-React search
29       37 DGSVWSQSA       1.142       Click here for PD Search       Click here for Cross-React search
81       89 AVIRGKKGS       1.136       Click here for PD Search       Click here for Cross-React search
78       86 EPGAVIRGK       1.135       Click here for PD Search       Click here for Cross-React search
90       98 GGITIKKTS       1.129       Click here for PD Search       Click here for Cross-React search
89       97 SGGITIKKT       1.129       Click here for PD Search       Click here for Cross-React search
82       90 VIRGKKGSG       1.113       Click here for PD Search       Click here for Cross-React search
85       93 GKKGSGGIT       1.093       Click here for PD Search       Click here for Cross-React search
48       56 AAILKDFDQ       1.037       Click here for PD Search       Click here for Cross-React search
34       42 SQSASFPAF       1.037       Click here for PD Search       Click here for Cross-React search
76       84 QGEPGAVIR       0.983       Click here for PD Search       Click here for Cross-React search
15       23 IDGNRLTAA       0.932       Click here for PD Search       Click here for Cross-React search
32       40 VWSQSASFP       0.925       Click here for PD Search       Click here for Cross-React search
30       38 GSVWSQSAS       0.916       Click here for PD Search       Click here for Cross-React search
45       53 EEIAAILKD       0.871       Click here for PD Search       Click here for Cross-React search
42       50 FKPEEIAAI       0.847       Click here for PD Search       Click here for Cross-React search
80       88 GAVIRGKKG       0.839       Click here for PD Search       Click here for Cross-React search
69       77 GTKYMVIQG       0.83       Click here for PD Search       Click here for Cross-React search
68       76 GGTKYMVIQ       0.83       Click here for PD Search       Click here for Cross-React search
13       21 CDIDGNRLT       0.817       Click here for PD Search       Click here for Cross-React search
44       52 PEEIAAILK       0.806       Click here for PD Search       Click here for Cross-React search
43       51 KPEEIAAIL       0.806       Click here for PD Search       Click here for Cross-React search
31       39 SVWSQSASF       0.802       Click here for PD Search       Click here for Cross-React search
88       96 GSGGITIKK       0.774       Click here for PD Search       Click here for Cross-React search
87       95 KGSGGITIK       0.774       Click here for PD Search       Click here for Cross-React search
86       94 KKGSGGITI       0.774       Click here for PD Search       Click here for Cross-React search
72       80 YMVIQGEPG       0.77       Click here for PD Search       Click here for Cross-React search
123       131 GDYLIEQGL       0.77       Click here for PD Search       Click here for Cross-React search
122       130 LGDYLIEQG       0.77       Click here for PD Search       Click here for Cross-React search
103       111 IGIYDEPVT       0.767       Click here for PD Search       Click here for Cross-React search
57       65 PGTLAPTGL       0.704       Click here for PD Search       Click here for Cross-React search
118       126 VVERLGDYL       0.692       Click here for PD Search       Click here for Cross-React search
26       34 LGQDGSVWS       0.688       Click here for PD Search       Click here for Cross-React search
8       16 DDHLMCDID       0.682       Click here for PD Search       Click here for Cross-React search
6       14 YVDDHLMCD       0.678       Click here for PD Search       Click here for Cross-React search
96       104 KTSQALLIG       0.671       Click here for PD Search       Click here for Cross-React search
119       127 VERLGDYLI       0.653       Click here for PD Search       Click here for Cross-React search
116       124 NIVVERLGD       0.603       Click here for PD Search       Click here for Cross-React search
117       125 IVVERLGDY       0.588       Click here for PD Search       Click here for Cross-React search
17       25 GNRLTAAAI       0.564       Click here for PD Search       Click here for Cross-React search
77       85 GEPGAVIRG       0.562       Click here for PD Search       Click here for Cross-React search
12       20 MCDIDGNRL       0.56       Click here for PD Search       Click here for Cross-React search
11       19 LMCDIDGNR       0.56       Click here for PD Search       Click here for Cross-React search
109       117 PVTPGQCNI       0.558       Click here for PD Search       Click here for Cross-React search
65       73 LFLGGTKYM       0.543       Click here for PD Search       Click here for Cross-React search
64       72 GLFLGGTKY       0.543       Click here for PD Search       Click here for Cross-React search
21       29 TAAAILGQD       0.518       Click here for PD Search       Click here for Cross-React search
63       71 TGLFLGGTK       0.5       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

Thanks for using SDAP Database