List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MSWQAYVDDHLMCEIDGQHLSSAAILGHDSTVWAQSPNFPQFKPEEISAILNDFENPGSL
APTGLYLGGTKYMVIQGEPGVVIRGKKGTGGITVKKTNLALIIGVYDEPMTPGQCNMVVE
RLGDYLLEQGF

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
38       46 NFPQFKPEE       5.235       Click here for PD Search       Click here for Cross-React search
37       45 PNFPQFKPE       4.674       Click here for PD Search       Click here for Cross-React search
106       114 YDEPMTPGQ       4.636       Click here for PD Search       Click here for Cross-React search
35       43 QSPNFPQFK       4.051       Click here for PD Search       Click here for Cross-React search
36       44 SPNFPQFKP       3.617       Click here for PD Search       Click here for Cross-React search
40       48 PQFKPEEIS       3.531       Click here for PD Search       Click here for Cross-React search
33       41 WAQSPNFPQ       2.485       Click here for PD Search       Click here for Cross-React search
41       49 QFKPEEISA       2.307       Click here for PD Search       Click here for Cross-React search
39       47 FPQFKPEEI       2.282       Click here for PD Search       Click here for Cross-React search
34       42 AQSPNFPQF       2.046       Click here for PD Search       Click here for Cross-React search
105       113 VYDEPMTPG       1.987       Click here for PD Search       Click here for Cross-React search
104       112 GVYDEPMTP       1.987       Click here for PD Search       Click here for Cross-React search
52       60 NDFENPGSL       1.914       Click here for PD Search       Click here for Cross-React search
51       59 LNDFENPGS       1.914       Click here for PD Search       Click here for Cross-React search
2       10 SWQAYVDDH       1.902       Click here for PD Search       Click here for Cross-React search
55       63 ENPGSLAPT       1.856       Click here for PD Search       Click here for Cross-React search
29       37 DSTVWAQSP       1.597       Click here for PD Search       Click here for Cross-React search
107       115 DEPMTPGQC       1.586       Click here for PD Search       Click here for Cross-React search
30       38 STVWAQSPN       1.538       Click here for PD Search       Click here for Cross-React search
108       116 EPMTPGQCN       1.527       Click here for PD Search       Click here for Cross-React search
121       129 RLGDYLLEQ       1.491       Click here for PD Search       Click here for Cross-React search
120       128 ERLGDYLLE       1.491       Click here for PD Search       Click here for Cross-React search
28       36 HDSTVWAQS       1.406       Click here for PD Search       Click here for Cross-React search
1       9 MSWQAYVDD       1.383       Click here for PD Search       Click here for Cross-React search
84       92 RGKKGTGGI       1.329       Click here for PD Search       Click here for Cross-React search
83       91 IRGKKGTGG       1.329       Click here for PD Search       Click here for Cross-React search
71       79 KYMVIQGEP       1.294       Click here for PD Search       Click here for Cross-React search
14       22 EIDGQHLSS       1.224       Click here for PD Search       Click here for Cross-React search
70       78 TKYMVIQGE       1.208       Click here for PD Search       Click here for Cross-React search
53       61 DFENPGSLA       1.203       Click here for PD Search       Click here for Cross-React search
93       101 TVKKTNLAL       1.194       Click here for PD Search       Click here for Cross-React search
90       98 GGITVKKTN       1.193       Click here for PD Search       Click here for Cross-React search
3       11 WQAYVDDHL       1.17       Click here for PD Search       Click here for Cross-React search
54       62 FENPGSLAP       1.114       Click here for PD Search       Click here for Cross-React search
4       12 QAYVDDHLM       1.101       Click here for PD Search       Click here for Cross-React search
89       97 TGGITVKKT       1.071       Click here for PD Search       Click here for Cross-React search
32       40 VWAQSPNFP       1.065       Click here for PD Search       Click here for Cross-React search
56       64 NPGSLAPTG       1.061       Click here for PD Search       Click here for Cross-React search
27       35 GHDSTVWAQ       1.038       Click here for PD Search       Click here for Cross-React search
16       24 DGQHLSSAA       1.029       Click here for PD Search       Click here for Cross-React search
49       57 AILNDFENP       1.022       Click here for PD Search       Click here for Cross-React search
92       100 ITVKKTNLA       1.015       Click here for PD Search       Click here for Cross-React search
50       58 ILNDFENPG       1.001       Click here for PD Search       Click here for Cross-React search
82       90 VIRGKKGTG       0.996       Click here for PD Search       Click here for Cross-React search
91       99 GITVKKTNL       0.994       Click here for PD Search       Click here for Cross-React search
31       39 TVWAQSPNF       0.994       Click here for PD Search       Click here for Cross-React search
85       93 GKKGTGGIT       0.979       Click here for PD Search       Click here for Cross-React search
42       50 FKPEEISAI       0.934       Click here for PD Search       Click here for Cross-React search
103       111 IGVYDEPMT       0.901       Click here for PD Search       Click here for Cross-React search
43       51 KPEEISAIL       0.889       Click here for PD Search       Click here for Cross-React search
48       56 SAILNDFEN       0.886       Click here for PD Search       Click here for Cross-React search
109       117 PMTPGQCNM       0.873       Click here for PD Search       Click here for Cross-React search
65       73 LYLGGTKYM       0.816       Click here for PD Search       Click here for Cross-React search
64       72 GLYLGGTKY       0.816       Click here for PD Search       Click here for Cross-React search
79       87 PGVVIRGKK       0.801       Click here for PD Search       Click here for Cross-React search
123       131 GDYLLEQGF       0.791       Click here for PD Search       Click here for Cross-React search
45       53 EEISAILND       0.772       Click here for PD Search       Click here for Cross-React search
122       130 LGDYLLEQG       0.753       Click here for PD Search       Click here for Cross-React search
63       71 TGLYLGGTK       0.752       Click here for PD Search       Click here for Cross-React search
81       89 VVIRGKKGT       0.747       Click here for PD Search       Click here for Cross-React search
66       74 YLGGTKYMV       0.735       Click here for PD Search       Click here for Cross-React search
88       96 GTGGITVKK       0.734       Click here for PD Search       Click here for Cross-React search
87       95 KGTGGITVK       0.734       Click here for PD Search       Click here for Cross-React search
86       94 KKGTGGITV       0.734       Click here for PD Search       Click here for Cross-React search
44       52 PEEISAILN       0.715       Click here for PD Search       Click here for Cross-React search
15       23 IDGQHLSSA       0.714       Click here for PD Search       Click here for Cross-React search
116       124 NMVVERLGD       0.708       Click here for PD Search       Click here for Cross-React search
78       86 EPGVVIRGK       0.693       Click here for PD Search       Click here for Cross-React search
69       77 GTKYMVIQG       0.69       Click here for PD Search       Click here for Cross-React search
68       76 GGTKYMVIQ       0.69       Click here for PD Search       Click here for Cross-React search
117       125 MVVERLGDY       0.69       Click here for PD Search       Click here for Cross-React search
72       80 YMVIQGEPG       0.64       Click here for PD Search       Click here for Cross-React search
119       127 VERLGDYLL       0.639       Click here for PD Search       Click here for Cross-React search
76       84 QGEPGVVIR       0.6       Click here for PD Search       Click here for Cross-React search
8       16 DDHLMCEID       0.588       Click here for PD Search       Click here for Cross-React search
6       14 YVDDHLMCE       0.584       Click here for PD Search       Click here for Cross-React search
62       70 PTGLYLGGT       0.581       Click here for PD Search       Click here for Cross-React search
94       102 VKKTNLALI       0.58       Click here for PD Search       Click here for Cross-React search
118       126 VVERLGDYL       0.575       Click here for PD Search       Click here for Cross-React search
58       66 GSLAPTGLY       0.551       Click here for PD Search       Click here for Cross-React search
95       103 KKTNLALII       0.548       Click here for PD Search       Click here for Cross-React search
57       65 PGSLAPTGL       0.544       Click here for PD Search       Click here for Cross-React search
80       88 GVVIRGKKG       0.512       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

Thanks for using SDAP Database