List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MSWQQYVDDHLMCDIDGNRLTAAAILGQDGSVWSQSATFPAFKPEEIAAILKDFDQPGTL
APTGLFLGGTKYMVIQGEAGAVIRGKKGSGGITVKKTNQALIIGIYDEPLTPGQCNMIVE
RLGDYLIEQGL

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
106       114 YDEPLTPGQ       4.356       Click here for PD Search       Click here for Cross-React search
2       10 SWQQYVDDH       3.676       Click here for PD Search       Click here for Cross-React search
38       46 TFPAFKPEE       3.09       Click here for PD Search       Click here for Cross-React search
52       60 KDFDQPGTL       3.002       Click here for PD Search       Click here for Cross-React search
51       59 LKDFDQPGT       3.002       Click here for PD Search       Click here for Cross-React search
93       101 TVKKTNQAL       2.827       Click here for PD Search       Click here for Cross-React search
1       9 MSWQQYVDD       2.674       Click here for PD Search       Click here for Cross-React search
92       100 ITVKKTNQA       2.403       Click here for PD Search       Click here for Cross-React search
91       99 GITVKKTNQ       2.354       Click here for PD Search       Click here for Cross-React search
55       63 DQPGTLAPT       2.34       Click here for PD Search       Click here for Cross-React search
3       11 WQQYVDDHL       2.262       Click here for PD Search       Click here for Cross-React search
4       12 QQYVDDHLM       2.129       Click here for PD Search       Click here for Cross-React search
28       36 QDGSVWSQS       1.835       Click here for PD Search       Click here for Cross-React search
37       45 ATFPAFKPE       1.803       Click here for PD Search       Click here for Cross-React search
105       113 IYDEPLTPG       1.763       Click here for PD Search       Click here for Cross-React search
104       112 GIYDEPLTP       1.763       Click here for PD Search       Click here for Cross-React search
40       48 PAFKPEEIA       1.751       Click here for PD Search       Click here for Cross-React search
35       43 QSATFPAFK       1.562       Click here for PD Search       Click here for Cross-React search
53       61 DFDQPGTLA       1.517       Click here for PD Search       Click here for Cross-React search
39       47 FPAFKPEEI       1.501       Click here for PD Search       Click here for Cross-React search
107       115 DEPLTPGQC       1.49       Click here for PD Search       Click here for Cross-React search
49       57 AILKDFDQP       1.489       Click here for PD Search       Click here for Cross-React search
50       58 ILKDFDQPG       1.458       Click here for PD Search       Click here for Cross-React search
14       22 DIDGNRLTA       1.444       Click here for PD Search       Click here for Cross-React search
108       116 EPLTPGQCN       1.435       Click here for PD Search       Click here for Cross-React search
121       129 RLGDYLIEQ       1.429       Click here for PD Search       Click here for Cross-React search
120       128 ERLGDYLIE       1.429       Click here for PD Search       Click here for Cross-React search
54       62 FDQPGTLAP       1.404       Click here for PD Search       Click here for Cross-React search
36       44 SATFPAFKP       1.395       Click here for PD Search       Click here for Cross-React search
84       92 RGKKGSGGI       1.391       Click here for PD Search       Click here for Cross-React search
83       91 IRGKKGSGG       1.391       Click here for PD Search       Click here for Cross-React search
56       64 QPGTLAPTG       1.387       Click here for PD Search       Click here for Cross-React search
94       102 VKKTNQALI       1.373       Click here for PD Search       Click here for Cross-React search
70       78 TKYMVIQGE       1.362       Click here for PD Search       Click here for Cross-React search
27       35 GQDGSVWSQ       1.355       Click here for PD Search       Click here for Cross-React search
90       98 GGITVKKTN       1.345       Click here for PD Search       Click here for Cross-React search
95       103 KKTNQALII       1.297       Click here for PD Search       Click here for Cross-React search
33       41 WSQSATFPA       1.271       Click here for PD Search       Click here for Cross-React search
16       24 DGNRLTAAA       1.259       Click here for PD Search       Click here for Cross-React search
41       49 AFKPEEIAA       1.144       Click here for PD Search       Click here for Cross-React search
89       97 SGGITVKKT       1.121       Click here for PD Search       Click here for Cross-React search
29       37 DGSVWSQSA       1.07       Click here for PD Search       Click here for Cross-React search
81       89 AVIRGKKGS       1.065       Click here for PD Search       Click here for Cross-React search
34       42 SQSATFPAF       1.047       Click here for PD Search       Click here for Cross-React search
82       90 VIRGKKGSG       1.043       Click here for PD Search       Click here for Cross-React search
85       93 GKKGSGGIT       1.025       Click here for PD Search       Click here for Cross-React search
48       56 AAILKDFDQ       0.973       Click here for PD Search       Click here for Cross-React search
71       79 KYMVIQGEA       0.954       Click here for PD Search       Click here for Cross-React search
32       40 VWSQSATFP       0.934       Click here for PD Search       Click here for Cross-React search
30       38 GSVWSQSAT       0.925       Click here for PD Search       Click here for Cross-React search
15       23 IDGNRLTAA       0.874       Click here for PD Search       Click here for Cross-React search
109       117 PLTPGQCNM       0.82       Click here for PD Search       Click here for Cross-React search
45       53 EEIAAILKD       0.816       Click here for PD Search       Click here for Cross-React search
31       39 SVWSQSATF       0.809       Click here for PD Search       Click here for Cross-React search
79       87 AGAVIRGKK       0.803       Click here for PD Search       Click here for Cross-React search
103       111 IGIYDEPLT       0.799       Click here for PD Search       Click here for Cross-React search
42       50 FKPEEIAAI       0.794       Click here for PD Search       Click here for Cross-React search
80       88 GAVIRGKKG       0.786       Click here for PD Search       Click here for Cross-React search
69       77 GTKYMVIQG       0.778       Click here for PD Search       Click here for Cross-React search
68       76 GGTKYMVIQ       0.778       Click here for PD Search       Click here for Cross-React search
88       96 GSGGITVKK       0.769       Click here for PD Search       Click here for Cross-React search
87       95 KGSGGITVK       0.769       Click here for PD Search       Click here for Cross-React search
86       94 KKGSGGITV       0.769       Click here for PD Search       Click here for Cross-React search
13       21 CDIDGNRLT       0.766       Click here for PD Search       Click here for Cross-React search
44       52 PEEIAAILK       0.756       Click here for PD Search       Click here for Cross-React search
43       51 KPEEIAAIL       0.756       Click here for PD Search       Click here for Cross-React search
116       124 NMIVERLGD       0.754       Click here for PD Search       Click here for Cross-React search
117       125 MIVERLGDY       0.735       Click here for PD Search       Click here for Cross-React search
123       131 GDYLIEQGL       0.722       Click here for PD Search       Click here for Cross-React search
122       130 LGDYLIEQG       0.722       Click here for PD Search       Click here for Cross-React search
78       86 EAGAVIRGK       0.695       Click here for PD Search       Click here for Cross-React search
57       65 PGTLAPTGL       0.66       Click here for PD Search       Click here for Cross-React search
5       13 QYVDDHLMC       0.659       Click here for PD Search       Click here for Cross-React search
26       34 LGQDGSVWS       0.645       Click here for PD Search       Click here for Cross-React search
96       104 KTNQALIIG       0.642       Click here for PD Search       Click here for Cross-React search
8       16 DDHLMCDID       0.64       Click here for PD Search       Click here for Cross-React search
6       14 YVDDHLMCD       0.635       Click here for PD Search       Click here for Cross-React search
119       127 VERLGDYLI       0.613       Click here for PD Search       Click here for Cross-React search
118       126 IVERLGDYL       0.613       Click here for PD Search       Click here for Cross-React search
76       84 QGEAGAVIR       0.602       Click here for PD Search       Click here for Cross-React search
17       25 GNRLTAAAI       0.528       Click here for PD Search       Click here for Cross-React search
12       20 MCDIDGNRL       0.525       Click here for PD Search       Click here for Cross-React search
11       19 LMCDIDGNR       0.525       Click here for PD Search       Click here for Cross-React search
65       73 LFLGGTKYM       0.509       Click here for PD Search       Click here for Cross-React search
64       72 GLFLGGTKY       0.509       Click here for PD Search       Click here for Cross-React search
113       121 GQCNMIVER       0.509       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

Thanks for using SDAP Database