List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MSWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFL
APTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVE
RLGDYLIESEL

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
38       46 KFPQLKPQE       5.54       Click here for PD Search       Click here for Cross-React search
40       48 PQLKPQEID       3.745       Click here for PD Search       Click here for Cross-React search
51       59 KKDFEEPGF       3.59       Click here for PD Search       Click here for Cross-React search
37       45 AKFPQLKPQ       3.232       Click here for PD Search       Click here for Cross-React search
48       56 DGIKKDFEE       3.139       Click here for PD Search       Click here for Cross-React search
50       58 IKKDFEEPG       2.906       Click here for PD Search       Click here for Cross-React search
49       57 GIKKDFEEP       2.906       Click here for PD Search       Click here for Cross-React search
35       43 QSAKFPQLK       2.801       Click here for PD Search       Click here for Cross-React search
106       114 YDEPMTGGQ       2.651       Click here for PD Search       Click here for Cross-React search
45       53 QEIDGIKKD       2.541       Click here for PD Search       Click here for Cross-React search
36       44 SAKFPQLKP       2.501       Click here for PD Search       Click here for Cross-React search
41       49 QLKPQEIDG       2.397       Click here for PD Search       Click here for Cross-React search
44       52 PQEIDGIKK       2.353       Click here for PD Search       Click here for Cross-React search
43       51 KPQEIDGIK       2.353       Click here for PD Search       Click here for Cross-React search
2       10 SWQSYVDDH       2.254       Click here for PD Search       Click here for Cross-React search
93       101 TIKKTNQAL       2.116       Click here for PD Search       Click here for Cross-React search
39       47 FPQLKPQEI       1.942       Click here for PD Search       Click here for Cross-React search
92       100 VTIKKTNQA       1.905       Click here for PD Search       Click here for Cross-React search
91       99 GVTIKKTNQ       1.866       Click here for PD Search       Click here for Cross-React search
33       41 WAQSAKFPQ       1.804       Click here for PD Search       Click here for Cross-React search
1       9 MSWQSYVDD       1.64       Click here for PD Search       Click here for Cross-React search
52       60 KDFEEPGFL       1.48       Click here for PD Search       Click here for Cross-React search
34       42 AQSAKFPQL       1.415       Click here for PD Search       Click here for Cross-React search
3       11 WQSYVDDHL       1.387       Click here for PD Search       Click here for Cross-React search
84       92 RGKKGPGGV       1.347       Click here for PD Search       Click here for Cross-React search
95       103 KKTNQALVF       1.344       Click here for PD Search       Click here for Cross-React search
105       113 FYDEPMTGG       1.326       Click here for PD Search       Click here for Cross-React search
104       112 GFYDEPMTG       1.326       Click here for PD Search       Click here for Cross-React search
4       12 QSYVDDHLM       1.306       Click here for PD Search       Click here for Cross-React search
71       79 KYMVIQGEQ       1.295       Click here for PD Search       Click here for Cross-React search
70       78 EKYMVIQGE       1.295       Click here for PD Search       Click here for Cross-React search
83       91 IRGKKGPGG       1.272       Click here for PD Search       Click here for Cross-React search
47       55 IDGIKKDFE       1.27       Click here for PD Search       Click here for Cross-React search
46       54 EIDGIKKDF       1.27       Click here for PD Search       Click here for Cross-React search
103       111 FGFYDEPMT       1.16       Click here for PD Search       Click here for Cross-React search
55       63 EEPGFLAPT       1.154       Click here for PD Search       Click here for Cross-React search
120       128 ERLGDYLIE       1.133       Click here for PD Search       Click here for Cross-React search
28       36 QDGSVWAQS       1.096       Click here for PD Search       Click here for Cross-React search
79       87 QGAVIRGKK       1.091       Click here for PD Search       Click here for Cross-React search
94       102 IKKTNQALV       1.088       Click here for PD Search       Click here for Cross-React search
90       98 GGVTIKKTN       1.066       Click here for PD Search       Click here for Cross-React search
89       97 PGGVTIKKT       1.025       Click here for PD Search       Click here for Cross-React search
85       93 GKKGPGGVT       0.992       Click here for PD Search       Click here for Cross-React search
81       89 AVIRGKKGP       0.974       Click here for PD Search       Click here for Cross-React search
42       50 LKPQEIDGI       0.97       Click here for PD Search       Click here for Cross-React search
82       90 VIRGKKGPG       0.954       Click here for PD Search       Click here for Cross-React search
78       86 EQGAVIRGK       0.945       Click here for PD Search       Click here for Cross-React search
107       115 DEPMTGGQC       0.907       Click here for PD Search       Click here for Cross-React search
121       129 RLGDYLIES       0.877       Click here for PD Search       Click here for Cross-React search
14       22 DVEGNHLTA       0.873       Click here for PD Search       Click here for Cross-React search
108       116 EPMTGGQCN       0.873       Click here for PD Search       Click here for Cross-React search
76       84 QGEQGAVIR       0.818       Click here for PD Search       Click here for Cross-React search
27       35 GQDGSVWAQ       0.81       Click here for PD Search       Click here for Cross-React search
123       131 GDYLIESEL       0.775       Click here for PD Search       Click here for Cross-React search
122       130 LGDYLIESE       0.775       Click here for PD Search       Click here for Cross-React search
32       40 VWAQSAKFP       0.773       Click here for PD Search       Click here for Cross-React search
30       38 GSVWAQSAK       0.766       Click here for PD Search       Click here for Cross-React search
53       61 DFEEPGFLA       0.748       Click here for PD Search       Click here for Cross-React search
69       77 GEKYMVIQG       0.74       Click here for PD Search       Click here for Cross-React search
68       76 GGEKYMVIQ       0.74       Click here for PD Search       Click here for Cross-React search
16       24 EGNHLTAAA       0.719       Click here for PD Search       Click here for Cross-React search
88       96 GPGGVTIKK       0.703       Click here for PD Search       Click here for Cross-React search
87       95 KGPGGVTIK       0.703       Click here for PD Search       Click here for Cross-React search
86       94 KKGPGGVTI       0.703       Click here for PD Search       Click here for Cross-React search
54       62 FEEPGFLAP       0.692       Click here for PD Search       Click here for Cross-React search
31       39 SVWAQSAKF       0.67       Click here for PD Search       Click here for Cross-React search
96       104 KTNQALVFG       0.665       Click here for PD Search       Click here for Cross-React search
56       64 EPGFLAPTG       0.659       Click here for PD Search       Click here for Cross-React search
72       80 YMVIQGEQG       0.641       Click here for PD Search       Click here for Cross-React search
29       37 DGSVWAQSA       0.639       Click here for PD Search       Click here for Cross-React search
80       88 GAVIRGKKG       0.623       Click here for PD Search       Click here for Cross-React search
102       110 VFGFYDEPM       0.597       Click here for PD Search       Click here for Cross-React search
8       16 DDHLMCDVE       0.557       Click here for PD Search       Click here for Cross-React search
15       23 VEGNHLTAA       0.528       Click here for PD Search       Click here for Cross-React search
116       124 NLVVERLGD       0.528       Click here for PD Search       Click here for Cross-React search
118       126 VVERLGDYL       0.514       Click here for PD Search       Click here for Cross-React search
117       125 LVVERLGDY       0.514       Click here for PD Search       Click here for Cross-React search
6       14 YVDDHLMCD       0.504       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

Thanks for using SDAP Database