List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MSWQTYVDDHLMCDIDGHRLTAAAIIGHDGSVWAQSSSFPQFKSDEVAAIMKDFDEPGSL
APTGLHLGSTKYMVIQGEPGAVIRGKKGSGGITVKKTSQALIIGIYDEPLTPGQCNMIVE
RLGDYLLEQGM

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
106       114 YDEPLTPGQ       4.043       Click here for PD Search       Click here for Cross-React search
38       46 SFPQFKSDE       3.815       Click here for PD Search       Click here for Cross-React search
51       59 MKDFDEPGS       3.105       Click here for PD Search       Click here for Cross-React search
35       43 QSSSFPQFK       3.061       Click here for PD Search       Click here for Cross-React search
37       45 SSFPQFKSD       2.952       Click here for PD Search       Click here for Cross-React search
2       10 SWQTYVDDH       2.843       Click here for PD Search       Click here for Cross-React search
52       60 KDFDEPGSL       2.587       Click here for PD Search       Click here for Cross-React search
40       48 PQFKSDEVA       2.465       Click here for PD Search       Click here for Cross-React search
36       44 SSSFPQFKS       2.369       Click here for PD Search       Click here for Cross-React search
93       101 TVKKTSQAL       2.187       Click here for PD Search       Click here for Cross-React search
39       47 FPQFKSDEV       2.113       Click here for PD Search       Click here for Cross-React search
1       9 MSWQTYVDD       2.068       Click here for PD Search       Click here for Cross-React search
55       63 DEPGSLAPT       2.017       Click here for PD Search       Click here for Cross-React search
33       41 WAQSSSFPQ       1.878       Click here for PD Search       Click here for Cross-React search
92       100 ITVKKTSQA       1.859       Click here for PD Search       Click here for Cross-React search
91       99 GITVKKTSQ       1.821       Click here for PD Search       Click here for Cross-React search
3       11 WQTYVDDHL       1.749       Click here for PD Search       Click here for Cross-React search
49       57 AIMKDFDEP       1.658       Click here for PD Search       Click here for Cross-React search
4       12 QTYVDDHLM       1.647       Click here for PD Search       Click here for Cross-React search
105       113 IYDEPLTPG       1.636       Click here for PD Search       Click here for Cross-React search
104       112 GIYDEPLTP       1.636       Click here for PD Search       Click here for Cross-React search
50       58 IMKDFDEPG       1.624       Click here for PD Search       Click here for Cross-React search
41       49 QFKSDEVAA       1.61       Click here for PD Search       Click here for Cross-React search
121       129 RLGDYLLEQ       1.561       Click here for PD Search       Click here for Cross-React search
120       128 ERLGDYLLE       1.561       Click here for PD Search       Click here for Cross-React search
34       42 AQSSSFPQF       1.546       Click here for PD Search       Click here for Cross-React search
107       115 DEPLTPGQC       1.383       Click here for PD Search       Click here for Cross-React search
71       79 KYMVIQGEP       1.354       Click here for PD Search       Click here for Cross-React search
108       116 EPLTPGQCN       1.332       Click here for PD Search       Click here for Cross-React search
53       61 DFDEPGSLA       1.307       Click here for PD Search       Click here for Cross-React search
84       92 RGKKGSGGI       1.291       Click here for PD Search       Click here for Cross-React search
83       91 IRGKKGSGG       1.291       Click here for PD Search       Click here for Cross-React search
70       78 TKYMVIQGE       1.264       Click here for PD Search       Click here for Cross-React search
54       62 FDEPGSLAP       1.21       Click here for PD Search       Click here for Cross-React search
56       64 EPGSLAPTG       1.195       Click here for PD Search       Click here for Cross-React search
79       87 PGAVIRGKK       1.14       Click here for PD Search       Click here for Cross-React search
14       22 DIDGHRLTA       1.134       Click here for PD Search       Click here for Cross-React search
48       56 AAIMKDFDE       1.083       Click here for PD Search       Click here for Cross-React search
94       102 VKKTSQALI       1.062       Click here for PD Search       Click here for Cross-React search
90       98 GGITVKKTS       1.04       Click here for PD Search       Click here for Cross-React search
89       97 SGGITVKKT       1.04       Click here for PD Search       Click here for Cross-React search
28       36 HDGSVWAQS       1.009       Click here for PD Search       Click here for Cross-React search
65       73 LHLGSTKYM       1.005       Click here for PD Search       Click here for Cross-React search
64       72 GLHLGSTKY       1.005       Click here for PD Search       Click here for Cross-React search
95       103 KKTSQALII       1.003       Click here for PD Search       Click here for Cross-React search
29       37 DGSVWAQSS       0.993       Click here for PD Search       Click here for Cross-React search
16       24 DGHRLTAAA       0.989       Click here for PD Search       Click here for Cross-React search
81       89 AVIRGKKGS       0.988       Click here for PD Search       Click here for Cross-React search
78       86 EPGAVIRGK       0.988       Click here for PD Search       Click here for Cross-React search
69       77 STKYMVIQG       0.978       Click here for PD Search       Click here for Cross-React search
68       76 GSTKYMVIQ       0.978       Click here for PD Search       Click here for Cross-React search
82       90 VIRGKKGSG       0.968       Click here for PD Search       Click here for Cross-React search
85       93 GKKGSGGIT       0.951       Click here for PD Search       Click here for Cross-React search
123       131 GDYLLEQGM       0.946       Click here for PD Search       Click here for Cross-React search
45       53 DEVAAIMKD       0.928       Click here for PD Search       Click here for Cross-React search
63       71 TGLHLGSTK       0.925       Click here for PD Search       Click here for Cross-React search
66       74 HLGSTKYMV       0.904       Click here for PD Search       Click here for Cross-React search
76       84 QGEPGAVIR       0.855       Click here for PD Search       Click here for Cross-React search
32       40 VWAQSSSFP       0.805       Click here for PD Search       Click here for Cross-React search
30       38 GSVWAQSSS       0.797       Click here for PD Search       Click here for Cross-React search
122       130 LGDYLLEQG       0.788       Click here for PD Search       Click here for Cross-React search
109       117 PLTPGQCNM       0.761       Click here for PD Search       Click here for Cross-React search
44       52 SDEVAAIMK       0.745       Click here for PD Search       Click here for Cross-React search
43       51 KSDEVAAIM       0.745       Click here for PD Search       Click here for Cross-React search
27       35 GHDGSVWAQ       0.745       Click here for PD Search       Click here for Cross-React search
103       111 IGIYDEPLT       0.742       Click here for PD Search       Click here for Cross-React search
80       88 GAVIRGKKG       0.73       Click here for PD Search       Click here for Cross-React search
62       70 PTGLHLGST       0.715       Click here for PD Search       Click here for Cross-React search
88       96 GSGGITVKK       0.713       Click here for PD Search       Click here for Cross-React search
87       95 KGSGGITVK       0.713       Click here for PD Search       Click here for Cross-React search
86       94 KKGSGGITV       0.713       Click here for PD Search       Click here for Cross-React search
116       124 NMIVERLGD       0.7       Click here for PD Search       Click here for Cross-React search
31       39 SVWAQSSSF       0.697       Click here for PD Search       Click here for Cross-React search
15       23 IDGHRLTAA       0.686       Click here for PD Search       Click here for Cross-React search
117       125 MIVERLGDY       0.682       Click here for PD Search       Click here for Cross-React search
72       80 YMVIQGEPG       0.67       Click here for PD Search       Click here for Cross-React search
119       127 VERLGDYLL       0.669       Click here for PD Search       Click here for Cross-React search
42       50 FKSDEVAAI       0.652       Click here for PD Search       Click here for Cross-React search
13       21 CDIDGHRLT       0.602       Click here for PD Search       Click here for Cross-React search
8       16 DDHLMCDID       0.594       Click here for PD Search       Click here for Cross-React search
6       14 YVDDHLMCD       0.59       Click here for PD Search       Click here for Cross-React search
57       65 PGSLAPTGL       0.569       Click here for PD Search       Click here for Cross-React search
118       126 IVERLGDYL       0.568       Click here for PD Search       Click here for Cross-React search
5       13 TYVDDHLMC       0.51       Click here for PD Search       Click here for Cross-React search
61       69 APTGLHLGS       0.501       Click here for PD Search       Click here for Cross-React search
58       66 GSLAPTGLH       0.501       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

Thanks for using SDAP Database