List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MTKVCSFVAVMLVMILVCDQFGANEAATCSASQLSPCLGAIQGGTAPSQDCCARLKNQQP
CICGFMKDPNLRQYVNSPNARKVAGQCGVSIPSC

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
66       74 MKDPNLRQY       6.504       Click here for PD Search       Click here for Cross-React search
67       75 KDPNLRQYV       4.878       Click here for PD Search       Click here for Cross-React search
74       82 YVNSPNARK       4.453       Click here for PD Search       Click here for Cross-React search
68       76 DPNLRQYVN       3.922       Click here for PD Search       Click here for Cross-React search
73       81 QYVNSPNAR       3.856       Click here for PD Search       Click here for Cross-React search
72       80 RQYVNSPNA       3.856       Click here for PD Search       Click here for Cross-React search
65       73 FMKDPNLRQ       3.594       Click here for PD Search       Click here for Cross-React search
71       79 LRQYVNSPN       3.148       Click here for PD Search       Click here for Cross-React search
70       78 NLRQYVNSP       3.148       Click here for PD Search       Click here for Cross-React search
69       77 PNLRQYVNS       3.148       Click here for PD Search       Click here for Cross-React search
76       84 NSPNARKVA       2.871       Click here for PD Search       Click here for Cross-React search
42       50 QGGTAPSQD       2.676       Click here for PD Search       Click here for Cross-React search
53       61 ARLKNQQPC       2.355       Click here for PD Search       Click here for Cross-React search
52       60 CARLKNQQP       2.355       Click here for PD Search       Click here for Cross-React search
78       86 PNARKVAGQ       2.283       Click here for PD Search       Click here for Cross-React search
75       83 VNSPNARKV       2.109       Click here for PD Search       Click here for Cross-React search
64       72 GFMKDPNLR       2.054       Click here for PD Search       Click here for Cross-React search
77       85 SPNARKVAG       1.767       Click here for PD Search       Click here for Cross-React search
54       62 RLKNQQPCI       1.634       Click here for PD Search       Click here for Cross-React search
19       27 DQFGANEAA       1.285       Click here for PD Search       Click here for Cross-React search
41       49 IQGGTAPSQ       1.123       Click here for PD Search       Click here for Cross-React search
20       28 QFGANEAAT       1.11       Click here for PD Search       Click here for Cross-React search
43       51 GGTAPSQDC       0.828       Click here for PD Search       Click here for Cross-React search
51       59 CCARLKNQQ       0.817       Click here for PD Search       Click here for Cross-React search
79       87 NARKVAGQC       0.791       Click here for PD Search       Click here for Cross-React search
50       58 DCCARLKNQ       0.787       Click here for PD Search       Click here for Cross-React search
49       57 QDCCARLKN       0.787       Click here for PD Search       Click here for Cross-React search
25       33 EAATCSASQ       0.776       Click here for PD Search       Click here for Cross-React search
28       36 TCSASQLSP       0.75       Click here for PD Search       Click here for Cross-React search
24       32 NEAATCSAS       0.72       Click here for PD Search       Click here for Cross-React search
18       26 CDQFGANEA       0.682       Click here for PD Search       Click here for Cross-React search
48       56 SQDCCARLK       0.656       Click here for PD Search       Click here for Cross-React search
40       48 AIQGGTAPS       0.655       Click here for PD Search       Click here for Cross-React search
46       54 APSQDCCAR       0.621       Click here for PD Search       Click here for Cross-React search
63       71 CGFMKDPNL       0.562       Click here for PD Search       Click here for Cross-React search
23       31 ANEAATCSA       0.543       Click here for PD Search       Click here for Cross-React search
56       64 KNQQPCICG       0.537       Click here for PD Search       Click here for Cross-React search
22       30 GANEAATCS       0.532       Click here for PD Search       Click here for Cross-React search
47       55 PSQDCCARL       0.507       Click here for PD Search       Click here for Cross-React search
17       25 VCDQFGANE       0.501       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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