List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MVQYRALVIAVILLLSTTVPEVHSKSIIDRERRDWLVIPDAAAAYIYEAVNKVSPRAGQF
LLDVSQTTVVSGIRNFLINETARLTKLAEQLMEKIKNLCYTKVLGY


Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
25       33 KSIIDRERR       4.504       Click here for PD Search       Click here for Cross-React search
26       34 SIIDRERRD       3.761       Click here for PD Search       Click here for Cross-React search
29       37 DRERRDWLV       3.676       Click here for PD Search       Click here for Cross-React search
28       36 IDRERRDWL       3.471       Click here for PD Search       Click here for Cross-React search
24       32 SKSIIDRER       3.081       Click here for PD Search       Click here for Cross-React search
89       97 EQLMEKIKN       3.008       Click here for PD Search       Click here for Cross-React search
27       35 IIDRERRDW       2.951       Click here for PD Search       Click here for Cross-React search
51       59 NKVSPRAGQ       2.64       Click here for PD Search       Click here for Cross-React search
79       87 NETARLTKL       2.457       Click here for PD Search       Click here for Cross-React search
86       94 KLAEQLMEK       2.223       Click here for PD Search       Click here for Cross-React search
23       31 HSKSIIDRE       2.141       Click here for PD Search       Click here for Cross-React search
78       86 INETARLTK       2.088       Click here for PD Search       Click here for Cross-React search
48       56 EAVNKVSPR       1.98       Click here for PD Search       Click here for Cross-React search
88       96 AEQLMEKIK       1.889       Click here for PD Search       Click here for Cross-React search
82       90 ARLTKLAEQ       1.852       Click here for PD Search       Click here for Cross-React search
17       25 TTVPEVHSK       1.763       Click here for PD Search       Click here for Cross-React search
18       26 TVPEVHSKS       1.637       Click here for PD Search       Click here for Cross-React search
85       93 TKLAEQLME       1.604       Click here for PD Search       Click here for Cross-React search
47       55 YEAVNKVSP       1.584       Click here for PD Search       Click here for Cross-React search
81       89 TARLTKLAE       1.543       Click here for PD Search       Click here for Cross-React search
80       88 ETARLTKLA       1.543       Click here for PD Search       Click here for Cross-React search
30       38 RERRDWLVI       1.543       Click here for PD Search       Click here for Cross-React search
83       91 RLTKLAEQL       1.512       Click here for PD Search       Click here for Cross-React search
90       98 QLMEKIKNL       1.432       Click here for PD Search       Click here for Cross-React search
52       60 KVSPRAGQF       1.421       Click here for PD Search       Click here for Cross-React search
94       102 KIKNLCYTK       1.418       Click here for PD Search       Click here for Cross-React search
93       101 EKIKNLCYT       1.228       Click here for PD Search       Click here for Cross-React search
31       39 ERRDWLVIP       1.218       Click here for PD Search       Click here for Cross-React search
16       24 STTVPEVHS       1.182       Click here for PD Search       Click here for Cross-React search
32       40 RRDWLVIPD       1.175       Click here for PD Search       Click here for Cross-React search
49       57 AVNKVSPRA       1.155       Click here for PD Search       Click here for Cross-React search
44       52 AYIYEAVNK       1.143       Click here for PD Search       Click here for Cross-React search
50       58 VNKVSPRAG       1.131       Click here for PD Search       Click here for Cross-React search
75       83 NFLINETAR       1.008       Click here for PD Search       Click here for Cross-React search
74       82 RNFLINETA       1.008       Click here for PD Search       Click here for Cross-React search
22       30 VHSKSIIDR       0.917       Click here for PD Search       Click here for Cross-React search
77       85 LINETARLT       0.861       Click here for PD Search       Click here for Cross-React search
92       100 MEKIKNLCY       0.842       Click here for PD Search       Click here for Cross-React search
45       53 YIYEAVNKV       0.84       Click here for PD Search       Click here for Cross-React search
40       48 DAAAAYIYE       0.816       Click here for PD Search       Click here for Cross-React search
55       63 PRAGQFLLD       0.812       Click here for PD Search       Click here for Cross-React search
21       29 EVHSKSIID       0.811       Click here for PD Search       Click here for Cross-React search
19       27 VPEVHSKSI       0.795       Click here for PD Search       Click here for Cross-React search
87       95 LAEQLMEKI       0.779       Click here for PD Search       Click here for Cross-React search
84       92 LTKLAEQLM       0.764       Click here for PD Search       Click here for Cross-React search
20       28 PEVHSKSII       0.751       Click here for PD Search       Click here for Cross-React search
39       47 PDAAAAYIY       0.728       Click here for PD Search       Click here for Cross-React search
15       23 LSTTVPEVH       0.727       Click here for PD Search       Click here for Cross-React search
46       54 IYEAVNKVS       0.718       Click here for PD Search       Click here for Cross-React search
73       81 IRNFLINET       0.699       Click here for PD Search       Click here for Cross-React search
63       71 DVSQTTVVS       0.696       Click here for PD Search       Click here for Cross-React search
59       67 QFLLDVSQT       0.666       Click here for PD Search       Click here for Cross-React search
54       62 SPRAGQFLL       0.651       Click here for PD Search       Click here for Cross-React search
96       104 KNLCYTKVL       0.619       Click here for PD Search       Click here for Cross-React search
33       41 RDWLVIPDA       0.606       Click here for PD Search       Click here for Cross-React search
53       61 VSPRAGQFL       0.586       Click here for PD Search       Click here for Cross-React search
43       51 AAYIYEAVN       0.577       Click here for PD Search       Click here for Cross-React search
66       74 QTTVVSGIR       0.569       Click here for PD Search       Click here for Cross-React search
60       68 FLLDVSQTT       0.555       Click here for PD Search       Click here for Cross-React search
67       75 TTVVSGIRN       0.529       Click here for PD Search       Click here for Cross-React search
95       103 IKNLCYTKV       0.526       Click here for PD Search       Click here for Cross-React search
76       84 FLINETARL       0.517       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/


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