List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MYVAGVSFQQDTMPVLVHRKLEVNHKPPAVKEIVKHLIQVLNPKLHLYLFPVRRNPGYLK
FTISLHLFLAHINCIHYSTSKLPSSSTLSSAKRSSISRNSSSSSLSDITMNSSESLPITL
SLLSSNIACFLAFSFAFCLAV

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
19       27 RKLEVNHKP       3.956       Click here for PD Search       Click here for Cross-React search
92       100 KRSSISRNS       3.928       Click here for PD Search       Click here for Cross-React search
24       32 NHKPPAVKE       3.826       Click here for PD Search       Click here for Cross-React search
18       26 HRKLEVNHK       3.482       Click here for PD Search       Click here for Cross-React search
20       28 KLEVNHKPP       3.123       Click here for PD Search       Click here for Cross-React search
53       61 RRNPGYLKF       2.975       Click here for PD Search       Click here for Cross-React search
91       99 AKRSSISRN       2.961       Click here for PD Search       Click here for Cross-React search
76       84 HYSTSKLPS       2.659       Click here for PD Search       Click here for Cross-React search
93       101 RSSISRNSS       2.632       Click here for PD Search       Click here for Cross-React search
77       85 YSTSKLPSS       2.619       Click here for PD Search       Click here for Cross-React search
52       60 VRRNPGYLK       2.55       Click here for PD Search       Click here for Cross-React search
90       98 SAKRSSISR       2.467       Click here for PD Search       Click here for Cross-React search
79       87 TSKLPSSST       2.412       Click here for PD Search       Click here for Cross-React search
78       86 STSKLPSSS       2.24       Click here for PD Search       Click here for Cross-React search
54       62 RNPGYLKFT       2.192       Click here for PD Search       Click here for Cross-React search
87       95 TLSSAKRSS       2.139       Click here for PD Search       Click here for Cross-React search
86       94 STLSSAKRS       2.139       Click here for PD Search       Click here for Cross-React search
85       93 SSTLSSAKR       2.139       Click here for PD Search       Click here for Cross-React search
98       106 RNSSSSSLS       2.119       Click here for PD Search       Click here for Cross-React search
97       105 SRNSSSSSL       2.119       Click here for PD Search       Click here for Cross-React search
50       58 FPVRRNPGY       2.07       Click here for PD Search       Click here for Cross-React search
51       59 PVRRNPGYL       1.971       Click here for PD Search       Click here for Cross-React search
99       107 NSSSSSLSD       1.806       Click here for PD Search       Click here for Cross-React search
96       104 ISRNSSSSS       1.801       Click here for PD Search       Click here for Cross-React search
95       103 SISRNSSSS       1.801       Click here for PD Search       Click here for Cross-React search
94       102 SSISRNSSS       1.801       Click here for PD Search       Click here for Cross-React search
48       56 YLFPVRRNP       1.725       Click here for PD Search       Click here for Cross-React search
109       117 TMNSSESLP       1.719       Click here for PD Search       Click here for Cross-React search
89       97 SSAKRSSIS       1.688       Click here for PD Search       Click here for Cross-React search
25       33 HKPPAVKEI       1.668       Click here for PD Search       Click here for Cross-React search
23       31 VNHKPPAVK       1.64       Click here for PD Search       Click here for Cross-React search
21       29 LEVNHKPPA       1.578       Click here for PD Search       Click here for Cross-React search
107       115 DITMNSSES       1.578       Click here for PD Search       Click here for Cross-React search
106       114 SDITMNSSE       1.578       Click here for PD Search       Click here for Cross-React search
84       92 SSSTLSSAK       1.463       Click here for PD Search       Click here for Cross-React search
22       30 EVNHKPPAV       1.42       Click here for PD Search       Click here for Cross-React search
75       83 IHYSTSKLP       1.391       Click here for PD Search       Click here for Cross-React search
81       89 KLPSSSTLS       1.378       Click here for PD Search       Click here for Cross-React search
80       88 SKLPSSSTL       1.378       Click here for PD Search       Click here for Cross-React search
6       14 VSFQQDTMP       1.342       Click here for PD Search       Click here for Cross-React search
7       15 SFQQDTMPV       1.342       Click here for PD Search       Click here for Cross-React search
17       25 VHRKLEVNH       1.292       Click here for PD Search       Click here for Cross-React search
111       119 NSSESLPIT       1.218       Click here for PD Search       Click here for Cross-React search
83       91 PSSSTLSSA       1.132       Click here for PD Search       Click here for Cross-React search
49       57 LFPVRRNPG       1.089       Click here for PD Search       Click here for Cross-React search
88       96 LSSAKRSSI       1.039       Click here for PD Search       Click here for Cross-React search
73       81 NCIHYSTSK       0.94       Click here for PD Search       Click here for Cross-React search
82       90 LPSSSTLSS       0.924       Click here for PD Search       Click here for Cross-React search
47       55 LYLFPVRRN       0.92       Click here for PD Search       Click here for Cross-React search
27       35 PPAVKEIVK       0.91       Click here for PD Search       Click here for Cross-React search
26       34 KPPAVKEIV       0.91       Click here for PD Search       Click here for Cross-React search
4       12 AGVSFQQDT       0.876       Click here for PD Search       Click here for Cross-React search
5       13 GVSFQQDTM       0.859       Click here for PD Search       Click here for Cross-React search
101       109 SSSSLSDIT       0.848       Click here for PD Search       Click here for Cross-React search
110       118 MNSSESLPI       0.835       Click here for PD Search       Click here for Cross-React search
8       16 FQQDTMPVL       0.826       Click here for PD Search       Click here for Cross-React search
28       36 PAVKEIVKH       0.801       Click here for PD Search       Click here for Cross-React search
100       108 SSSSSLSDI       0.787       Click here for PD Search       Click here for Cross-React search
55       63 NPGYLKFTI       0.784       Click here for PD Search       Click here for Cross-React search
16       24 LVHRKLEVN       0.783       Click here for PD Search       Click here for Cross-React search
108       116 ITMNSSESL       0.779       Click here for PD Search       Click here for Cross-React search
46       54 HLYLFPVRR       0.778       Click here for PD Search       Click here for Cross-React search
14       22 PVLVHRKLE       0.753       Click here for PD Search       Click here for Cross-React search
12       20 TMPVLVHRK       0.753       Click here for PD Search       Click here for Cross-React search
105       113 LSDITMNSS       0.751       Click here for PD Search       Click here for Cross-React search
104       112 SLSDITMNS       0.751       Click here for PD Search       Click here for Cross-React search
103       111 SSLSDITMN       0.751       Click here for PD Search       Click here for Cross-React search
42       50 NPKLHLYLF       0.725       Click here for PD Search       Click here for Cross-React search
9       17 QQDTMPVLV       0.708       Click here for PD Search       Click here for Cross-React search
43       51 PKLHLYLFP       0.697       Click here for PD Search       Click here for Cross-React search
41       49 LNPKLHLYL       0.691       Click here for PD Search       Click here for Cross-React search
31       39 KEIVKHLIQ       0.691       Click here for PD Search       Click here for Cross-React search
39       47 QVLNPKLHL       0.687       Click here for PD Search       Click here for Cross-React search
56       64 PGYLKFTIS       0.654       Click here for PD Search       Click here for Cross-React search
11       19 DTMPVLVHR       0.629       Click here for PD Search       Click here for Cross-React search
102       110 SSSLSDITM       0.626       Click here for PD Search       Click here for Cross-React search
113       121 SESLPITLS       0.624       Click here for PD Search       Click here for Cross-React search
112       120 SSESLPITL       0.624       Click here for PD Search       Click here for Cross-React search
40       48 VLNPKLHLY       0.622       Click here for PD Search       Click here for Cross-React search
38       46 IQVLNPKLH       0.584       Click here for PD Search       Click here for Cross-React search
36       44 HLIQVLNPK       0.584       Click here for PD Search       Click here for Cross-React search
35       43 KHLIQVLNP       0.584       Click here for PD Search       Click here for Cross-React search
10       18 QDTMPVLVH       0.556       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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