List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

PAGPFRIPKCRKEFQQAQHLRACQQWLHKQAMQSGSGPSWTLDDEFDFEDDMENPQGPQQ
RPPLLQQCCNELHQEEPLCVCPTLKGASKAVKQQVRQQLEQQGQQGPHLQHVISRIYQTA
THLPKVCNIPQVSVCPFKKTMPGPS

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
53       61 ENPQGPQQR       5.238       Click here for PD Search       Click here for Cross-React search
54       62 NPQGPQQRP       4.677       Click here for PD Search       Click here for Cross-React search
55       63 PQGPQQRPP       4.497       Click here for PD Search       Click here for Cross-React search
96       104 RQQLEQQGQ       3.37       Click here for PD Search       Click here for Cross-React search
11       19 RKEFQQAQH       3.277       Click here for PD Search       Click here for Cross-React search
97       105 QQLEQQGQQ       2.98       Click here for PD Search       Click here for Cross-React search
92       100 KQQVRQQLE       2.918       Click here for PD Search       Click here for Cross-React search
49       57 EDDMENPQG       2.756       Click here for PD Search       Click here for Cross-React search
52       60 MENPQGPQQ       2.647       Click here for PD Search       Click here for Cross-React search
51       59 DMENPQGPQ       2.552       Click here for PD Search       Click here for Cross-React search
94       102 QVRQQLEQQ       2.527       Click here for PD Search       Click here for Cross-React search
93       101 QQVRQQLEQ       2.527       Click here for PD Search       Click here for Cross-React search
100       108 EQQGQQGPH       2.508       Click here for PD Search       Click here for Cross-React search
50       58 DDMENPQGP       2.461       Click here for PD Search       Click here for Cross-React search
48       56 FEDDMENPQ       2.412       Click here for PD Search       Click here for Cross-React search
56       64 QGPQQRPPL       2.399       Click here for PD Search       Click here for Cross-React search
47       55 DFEDDMENP       2.326       Click here for PD Search       Click here for Cross-React search
43       51 DDEFDFEDD       2.282       Click here for PD Search       Click here for Cross-React search
8       16 PKCRKEFQQ       2.282       Click here for PD Search       Click here for Cross-React search
59       67 QQRPPLLQQ       2.239       Click here for PD Search       Click here for Cross-React search
58       66 PQQRPPLLQ       1.999       Click here for PD Search       Click here for Cross-React search
89       97 KAVKQQVRQ       1.769       Click here for PD Search       Click here for Cross-React search
98       106 QLEQQGQQG       1.703       Click here for PD Search       Click here for Cross-React search
70       78 NELHQEEPL       1.617       Click here for PD Search       Click here for Cross-React search
117       125 YQTATHLPK       1.548       Click here for PD Search       Click here for Cross-React search
90       98 AVKQQVRQQ       1.532       Click here for PD Search       Click here for Cross-React search
99       107 LEQQGQQGP       1.52       Click here for PD Search       Click here for Cross-React search
9       17 KCRKEFQQA       1.491       Click here for PD Search       Click here for Cross-React search
95       103 VRQQLEQQG       1.444       Click here for PD Search       Click here for Cross-React search
136       144 PFKKTMPGP       1.414       Click here for PD Search       Click here for Cross-React search
45       53 EFDFEDDME       1.403       Click here for PD Search       Click here for Cross-React search
12       20 KEFQQAQHL       1.38       Click here for PD Search       Click here for Cross-React search
88       96 SKAVKQQVR       1.369       Click here for PD Search       Click here for Cross-React search
44       52 DEFDFEDDM       1.353       Click here for PD Search       Click here for Cross-React search
13       21 EFQQAQHLR       1.351       Click here for PD Search       Click here for Cross-React search
46       54 FDFEDDMEN       1.302       Click here for PD Search       Click here for Cross-React search
10       18 CRKEFQQAQ       1.291       Click here for PD Search       Click here for Cross-React search
91       99 VKQQVRQQL       1.251       Click here for PD Search       Click here for Cross-React search
137       145 FKKTMPGPS       1.225       Click here for PD Search       Click here for Cross-React search
102       110 QGQQGPHLQ       1.194       Click here for PD Search       Click here for Cross-React search
101       109 QQGQQGPHL       1.194       Click here for PD Search       Click here for Cross-React search
57       65 GPQQRPPLL       1.142       Click here for PD Search       Click here for Cross-React search
28       36 HKQAMQSGS       1.133       Click here for PD Search       Click here for Cross-React search
42       50 LDDEFDFED       1.127       Click here for PD Search       Click here for Cross-React search
114       122 SRIYQTATH       1.117       Click here for PD Search       Click here for Cross-React search
85       93 KGASKAVKQ       1.087       Click here for PD Search       Click here for Cross-React search
69       77 CNELHQEEP       1.051       Click here for PD Search       Click here for Cross-React search
6       14 RIPKCRKEF       1.045       Click here for PD Search       Click here for Cross-React search
5       13 FRIPKCRKE       1.045       Click here for PD Search       Click here for Cross-React search
41       49 TLDDEFDFE       0.974       Click here for PD Search       Click here for Cross-React search
37       45 GPSWTLDDE       0.968       Click here for PD Search       Click here for Cross-React search
25       33 QWLHKQAMQ       0.957       Click here for PD Search       Click here for Cross-React search
24       32 QQWLHKQAM       0.957       Click here for PD Search       Click here for Cross-React search
86       94 GASKAVKQQ       0.942       Click here for PD Search       Click here for Cross-React search
103       111 GQQGPHLQH       0.938       Click here for PD Search       Click here for Cross-React search
4       12 PFRIPKCRK       0.933       Click here for PD Search       Click here for Cross-React search
7       15 IPKCRKEFQ       0.924       Click here for PD Search       Click here for Cross-React search
39       47 SWTLDDEFD       0.915       Click here for PD Search       Click here for Cross-React search
38       46 PSWTLDDEF       0.847       Click here for PD Search       Click here for Cross-React search
29       37 KQAMQSGSG       0.824       Click here for PD Search       Click here for Cross-React search
14       22 FQQAQHLRA       0.788       Click here for PD Search       Click here for Cross-React search
82       90 PTLKGASKA       0.778       Click here for PD Search       Click here for Cross-React search
36       44 SGPSWTLDD       0.749       Click here for PD Search       Click here for Cross-React search
33       41 QSGSGPSWT       0.748       Click here for PD Search       Click here for Cross-React search
26       34 WLHKQAMQS       0.741       Click here for PD Search       Click here for Cross-React search
118       126 QTATHLPKV       0.733       Click here for PD Search       Click here for Cross-React search
87       95 ASKAVKQQV       0.706       Click here for PD Search       Click here for Cross-React search
104       112 QQGPHLQHV       0.704       Click here for PD Search       Click here for Cross-React search
27       35 LHKQAMQSG       0.697       Click here for PD Search       Click here for Cross-React search
60       68 QRPPLLQQC       0.693       Click here for PD Search       Click here for Cross-React search
1       9 PAGPFRIPK       0.687       Click here for PD Search       Click here for Cross-React search
115       123 RIYQTATHL       0.687       Click here for PD Search       Click here for Cross-React search
30       38 QAMQSGSGP       0.637       Click here for PD Search       Click here for Cross-React search
40       48 WTLDDEFDF       0.591       Click here for PD Search       Click here for Cross-React search
21       29 RACQQWLHK       0.587       Click here for PD Search       Click here for Cross-React search
113       121 ISRIYQTAT       0.575       Click here for PD Search       Click here for Cross-React search
116       124 IYQTATHLP       0.543       Click here for PD Search       Click here for Cross-React search
71       79 ELHQEEPLC       0.539       Click here for PD Search       Click here for Cross-React search
23       31 CQQWLHKQA       0.519       Click here for PD Search       Click here for Cross-React search
22       30 ACQQWLHKQ       0.519       Click here for PD Search       Click here for Cross-React search
84       92 LKGASKAVK       0.518       Click here for PD Search       Click here for Cross-React search
32       40 MQSGSGPSW       0.513       Click here for PD Search       Click here for Cross-React search
18       26 QHLRACQQW       0.508       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

Thanks for using SDAP Database