List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

SAGPFRIPKCRKEFQQAQHLRACQQWLHKQAMQSGSGPQGPQQRPPLLQQCCNELHQEEP
LCVCPTLKGASRAVKQQVRQQQGQQGQQLQQVISRIYQTATHLPKVCNIPQVSVCPFQKT
MPGPS

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
38       46 PQGPQQRPP       4.864       Click here for PD Search       Click here for Cross-React search
79       87 RQQQGQQGQ       4.373       Click here for PD Search       Click here for Cross-React search
80       88 QQQGQQGQQ       3.867       Click here for PD Search       Click here for Cross-React search
75       83 KQQVRQQQG       3.788       Click here for PD Search       Click here for Cross-React search
11       19 RKEFQQAQH       3.544       Click here for PD Search       Click here for Cross-React search
77       85 QVRQQQGQQ       3.28       Click here for PD Search       Click here for Cross-React search
76       84 QQVRQQQGQ       3.28       Click here for PD Search       Click here for Cross-React search
37       45 GPQGPQQRP       3.113       Click here for PD Search       Click here for Cross-React search
74       82 VKQQVRQQQ       2.841       Click here for PD Search       Click here for Cross-React search
36       44 SGPQGPQQR       2.698       Click here for PD Search       Click here for Cross-React search
39       47 QGPQQRPPL       2.594       Click here for PD Search       Click here for Cross-React search
8       16 PKCRKEFQQ       2.468       Click here for PD Search       Click here for Cross-React search
42       50 QQRPPLLQQ       2.421       Click here for PD Search       Click here for Cross-React search
41       49 PQQRPPLLQ       2.162       Click here for PD Search       Click here for Cross-React search
78       86 VRQQQGQQG       1.874       Click here for PD Search       Click here for Cross-React search
72       80 RAVKQQVRQ       1.874       Click here for PD Search       Click here for Cross-React search
83       91 GQQGQQLQQ       1.841       Click here for PD Search       Click here for Cross-React search
82       90 QGQQGQQLQ       1.841       Click here for PD Search       Click here for Cross-React search
81       89 QQGQQGQQL       1.841       Click here for PD Search       Click here for Cross-React search
53       61 NELHQEEPL       1.749       Click here for PD Search       Click here for Cross-React search
97       105 YQTATHLPK       1.674       Click here for PD Search       Click here for Cross-React search
73       81 AVKQQVRQQ       1.657       Click here for PD Search       Click here for Cross-React search
9       17 KCRKEFQQA       1.612       Click here for PD Search       Click here for Cross-React search
12       20 KEFQQAQHL       1.492       Click here for PD Search       Click here for Cross-React search
13       21 EFQQAQHLR       1.462       Click here for PD Search       Click here for Cross-React search
71       79 SRAVKQQVR       1.45       Click here for PD Search       Click here for Cross-React search
10       18 CRKEFQQAQ       1.396       Click here for PD Search       Click here for Cross-React search
84       92 QQGQQLQQV       1.381       Click here for PD Search       Click here for Cross-React search
35       43 GSGPQGPQQ       1.363       Click here for PD Search       Click here for Cross-React search
116       124 PFQKTMPGP       1.324       Click here for PD Search       Click here for Cross-React search
40       48 GPQQRPPLL       1.235       Click here for PD Search       Click here for Cross-React search
28       36 HKQAMQSGS       1.225       Click here for PD Search       Click here for Cross-React search
94       102 SRIYQTATH       1.208       Click here for PD Search       Click here for Cross-React search
68       76 KGASRAVKQ       1.152       Click here for PD Search       Click here for Cross-React search
117       125 FQKTMPGPS       1.148       Click here for PD Search       Click here for Cross-React search
52       60 CNELHQEEP       1.137       Click here for PD Search       Click here for Cross-React search
6       14 RIPKCRKEF       1.13       Click here for PD Search       Click here for Cross-React search
5       13 FRIPKCRKE       1.13       Click here for PD Search       Click here for Cross-React search
34       42 SGSGPQGPQ       1.055       Click here for PD Search       Click here for Cross-React search
33       41 QSGSGPQGP       1.055       Click here for PD Search       Click here for Cross-React search
25       33 QWLHKQAMQ       1.036       Click here for PD Search       Click here for Cross-React search
24       32 QQWLHKQAM       1.036       Click here for PD Search       Click here for Cross-React search
4       12 PFRIPKCRK       1.009       Click here for PD Search       Click here for Cross-React search
7       15 IPKCRKEFQ       0.999       Click here for PD Search       Click here for Cross-React search
69       77 GASRAVKQQ       0.997       Click here for PD Search       Click here for Cross-React search
29       37 KQAMQSGSG       0.891       Click here for PD Search       Click here for Cross-React search
87       95 QQLQQVISR       0.856       Click here for PD Search       Click here for Cross-React search
14       22 FQQAQHLRA       0.853       Click here for PD Search       Click here for Cross-React search
65       73 PTLKGASRA       0.825       Click here for PD Search       Click here for Cross-React search
26       34 WLHKQAMQS       0.801       Click here for PD Search       Click here for Cross-React search
98       106 QTATHLPKV       0.793       Click here for PD Search       Click here for Cross-React search
27       35 LHKQAMQSG       0.754       Click here for PD Search       Click here for Cross-React search
43       51 QRPPLLQQC       0.749       Click here for PD Search       Click here for Cross-React search
70       78 ASRAVKQQV       0.748       Click here for PD Search       Click here for Cross-React search
95       103 RIYQTATHL       0.743       Click here for PD Search       Click here for Cross-React search
31       39 AMQSGSGPQ       0.689       Click here for PD Search       Click here for Cross-React search
30       38 QAMQSGSGP       0.689       Click here for PD Search       Click here for Cross-React search
32       40 MQSGSGPQG       0.675       Click here for PD Search       Click here for Cross-React search
90       98 QQVISRIYQ       0.658       Click here for PD Search       Click here for Cross-React search
1       9 SAGPFRIPK       0.644       Click here for PD Search       Click here for Cross-React search
21       29 RACQQWLHK       0.634       Click here for PD Search       Click here for Cross-React search
93       101 ISRIYQTAT       0.622       Click here for PD Search       Click here for Cross-React search
96       104 IYQTATHLP       0.587       Click here for PD Search       Click here for Cross-React search
54       62 ELHQEEPLC       0.583       Click here for PD Search       Click here for Cross-React search
23       31 CQQWLHKQA       0.561       Click here for PD Search       Click here for Cross-React search
22       30 ACQQWLHKQ       0.561       Click here for PD Search       Click here for Cross-React search
85       93 QGQQLQQVI       0.559       Click here for PD Search       Click here for Cross-React search
91       99 QVISRIYQT       0.549       Click here for PD Search       Click here for Cross-React search
18       26 QHLRACQQW       0.549       Click here for PD Search       Click here for Cross-React search
67       75 LKGASRAVK       0.548       Click here for PD Search       Click here for Cross-React search
17       25 AQHLRACQQ       0.528       Click here for PD Search       Click here for Cross-React search
16       24 QAQHLRACQ       0.528       Click here for PD Search       Click here for Cross-React search
15       23 QQAQHLRAC       0.528       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

Thanks for using SDAP Database