Searching millions of patches.. Please wait. Approxinate wait time is ~2min.

(You can also access your files after the search at : http://fermi.utmb.edu/tmp/CrossReact173.html )

Welcome to Prediction of allergen cross reactivity server.

Please wait, this page will load automatically . Your project SDCR.1904 started on: Tue Nov 28 17:43:19 2023

Please note: Sequence identity is based on user defined PDB file and 3D allergen structures in SDAP database.

Avergae time for project completion is about 90 Seconds. Searching for potential cross-reactive allergens ... p8A8

Cross-Reactive allergen predicted with high confidence using : a) high PCC and b) high sequence indentity:

Correlation Sequence Patch Center Total residue View Molecule Compare
Allergen Name PCC Identity Residue No Results
Ole_e_1.0101
0.96 100 193 415 View PDB file
Ole_e_1.0101
0.84 100 192 415 View PDB file
Ole_e_1.0101
0.79 100 191 415 View PDB file
Ole_e_1.0101
0.78 100 173 415 View PDB file
Ole_e_1.0101
0.76 100 304 415 View PDB file
Ole_e_1.0101
0.72 100 305 415 View PDB file
Ole_e_1.0101
0.69 100 98 415 View PDB file
Ole_e_1.0101
0.68 100 312 415 View PDB file
Ole_e_1.0101
0.67 100 311 415 View PDB file
Ole_e_1.0101
0.67 100 310 415 View PDB file
Ole_e_1.0101
0.66 100 172 415 View PDB file
Ole_e_1.0101
0.63 100 345 415 View PDB file
Ole_e_1.0101
0.62 100 155 415 View PDB file
Ole_e_1.0101
0.59 100 156 415 View PDB file
Ole_e_1.0101
0.59 100 136 415 View PDB file
Ole_e_1.0101
0.59 100 97 415 View PDB file
Ole_e_1.0101
0.58 100 379 415 View PDB file
Ole_e_1.0101
0.58 100 344 415 View PDB file
Ole_e_1.0101
0.58 100 331 415 View PDB file
Ole_e_1.0101
0.58 100 269 415 View PDB file
Ole_e_1.0101
0.54 100 378 415 View PDB file
Ole_e_1.0101
0.53 100 135 415 View PDB file
Ole_e_1.0101
0.52 100 259 415 View PDB file
Ole_e_1.0101
0.52 100 159 415 View PDB file
Ole_e_1.0101
0.50 100 327 415 View PDB file

Cross-Reactive allergen predicted with medium confidence using : a) high PCC and b) moderate sequence indentity:

Correlation Sequence Patch Center Total residue View Molecule Compare
Allergen Name PCC Identity Residue No Results
Tri_r_2.0101
0.68 31.1 65 412 View PDB file
Tri_r_2.0101
0.63 31.1 64 412 View PDB file
Tri_r_2.0101
0.61 31.1 63 412 View PDB file
Tri_r_2.0101
0.60 31.1 66 412 View PDB file
Asp_f_9
0.60 40.4 222 302 View PDB file
Asp_f_9
0.60 40.4 145 302 View PDB file
Tri_r_2.0101
0.59 31.1 192 412 View PDB file
Asp_f_9
0.58 40.4 146 302 View PDB file
Asp_f_9
0.58 40.4 45 302 View PDB file
Act_d_9.0101
0.58 30.8 109 109 View PDB file
Tri_r_2.0101
0.57 31.1 68 412 View PDB file
Asp_f_9
0.54 40.4 211 302 View PDB file
Tri_r_2.0101
0.53 31.1 272 412 View PDB file
Asp_f_9
0.53 40.4 157 302 View PDB file
Asp_f_9
0.53 40.4 44 302 View PDB file
Tri_r_2.0101
0.52 31.1 186 412 View PDB file
Tri_r_2.0101
0.52 31.1 62 412 View PDB file
Asp_f_9
0.52 40.4 224 302 View PDB file
Asp_f_9
0.51 40.4 43 302 View PDB file
Asp_f_9
0.51 40.4 39 302 View PDB file
Asp_f_9
0.50 40.4 38 302 View PDB file

The project was successfully completed. Thank you for using CrossReact: Webserver to predict crossreactivity between allergenic proteins.

Please cite Cross-React method and website http://curie.utmb.edu/ for your future publications. In case of error contact Surendra S Negi ssnegiATutmb.edu .

Cross-React method is developed and designed by Surendra Negi. Please cite our publication in your work (Negi SS and Braun W, Cross-React: a new structural bioinformatics method for predicting allergen cross-reactivity. Bioinformatics 33 (7): 1014-1020, 2017). The Table format is made possible with the help of chives tables by chives

The project started on: Tue Nov 28 17:43:19 2023 , current time is: Tue Nov 28 17:43:32 2023 . For more information visit http://curie.utmb.edu/Cross-React.html

Thanks for using SDAP Database