Searching millions of patches.. Please wait. Approxinate wait time is ~2min.

(You can also access your files after the search at : http://fermi.utmb.edu/tmp/CrossReact159.html )

Welcome to Prediction of allergen cross reactivity server.

Please wait, this page will load automatically . Your project SDCR.1460 started on: Tue Nov 28 05:09:57 2023

Please note: Sequence identity is based on user defined PDB file and 3D allergen structures in SDAP database.

Avergae time for project completion is about 90 Seconds. Searching for potential cross-reactive allergens ... p8A8

Cross-Reactive allergen predicted with high confidence using : a) high PCC and b) high sequence indentity:

Correlation Sequence Patch Center Total residue View Molecule Compare
Allergen Name PCC Identity Residue No Results
Ole_e_1.0101
0.86 100 266 415 View PDB file
Ole_e_1.0101
0.72 100 267 415 View PDB file
Ole_e_1.0101
0.70 100 298 415 View PDB file
Ole_e_1.0101
0.70 100 125 415 View PDB file
Ole_e_1.0101
0.68 100 265 415 View PDB file
Ole_e_1.0101
0.67 100 129 415 View PDB file
Ole_e_1.0101
0.66 100 276 415 View PDB file
Ole_e_1.0101
0.61 100 130 415 View PDB file
Ole_e_1.0101
0.61 100 48 415 View PDB file
Ole_e_1.0101
0.57 100 269 415 View PDB file
Ole_e_1.0101
0.53 100 297 415 View PDB file
Ole_e_1.0101
0.53 100 46 415 View PDB file
Ole_e_1.0101
0.52 100 294 415 View PDB file
Ole_e_1.0101
0.51 100 44 415 View PDB file
Ole_e_1.0101
0.51 100 43 415 View PDB file

Cross-Reactive allergen predicted with medium confidence using : a) high PCC and b) moderate sequence indentity:

Correlation Sequence Patch Center Total residue View Molecule Compare
Allergen Name PCC Identity Residue No Results
Tri_r_2.0101
0.70 31.1 190 412 View PDB file
Tri_r_2.0101
0.68 31.1 325 412 View PDB file
Tri_r_2.0101
0.68 31.1 189 412 View PDB file
Act_d_9.0101
0.68 30.8 28 109 View PDB file
Asp_f_9
0.66 40.4 65 302 View PDB file
Tri_r_2.0101
0.65 31.1 178 412 View PDB file
Tri_r_2.0101
0.61 31.1 79 412 View PDB file
Act_d_9.0101
0.61 30.8 35 109 View PDB file
Tri_r_2.0101
0.60 31.1 108 412 View PDB file
Asp_f_9
0.60 40.4 275 302 View PDB file
Tri_r_2.0101
0.59 31.1 299 412 View PDB file
Tri_r_2.0101
0.59 31.1 110 412 View PDB file
Asp_f_9
0.59 40.4 96 302 View PDB file
Tri_r_2.0101
0.57 31.1 191 412 View PDB file
Act_d_9.0101
0.57 30.8 41 109 View PDB file
Act_d_9.0101
0.56 30.8 29 109 View PDB file
Tri_r_2.0101
0.54 31.1 301 412 View PDB file
Tri_r_2.0101
0.53 31.1 80 412 View PDB file
Asp_f_9
0.53 40.4 87 302 View PDB file
Tri_r_2.0101
0.52 31.1 320 412 View PDB file
Tri_r_2.0101
0.52 31.1 50 412 View PDB file
Tri_r_2.0101
0.52 31.1 47 412 View PDB file
Tri_r_2.0101
0.51 31.1 176 412 View PDB file
Tri_r_2.0101
0.50 31.1 332 412 View PDB file
Tri_r_2.0101
0.50 31.1 130 412 View PDB file
Asp_f_9
0.50 40.4 86 302 View PDB file

The project was successfully completed. Thank you for using CrossReact: Webserver to predict crossreactivity between allergenic proteins.

Please cite Cross-React method and website http://curie.utmb.edu/ for your future publications. In case of error contact Surendra S Negi ssnegiATutmb.edu .

Cross-React method is developed and designed by Surendra Negi. Please cite our publication in your work (Negi SS and Braun W, Cross-React: a new structural bioinformatics method for predicting allergen cross-reactivity. Bioinformatics 33 (7): 1014-1020, 2017). The Table format is made possible with the help of chives tables by chives

The project started on: Tue Nov 28 05:09:57 2023 , current time is: Tue Nov 28 05:10:10 2023 . For more information visit http://curie.utmb.edu/Cross-React.html

Thanks for using SDAP Database