Searching millions of patches.. Please wait. Approxinate wait time is ~2min.

(You can also access your files after the search at : http://fermi.utmb.edu/tmp/CrossReact161.html )

Welcome to Prediction of allergen cross reactivity server.

Please wait, this page will load automatically . Your project SDCR.1511 started on: Sat Apr 27 13:09:37 2024

Please note: Sequence identity is based on user defined PDB file and 3D allergen structures in SDAP database.

Avergae time for project completion is about 90 Seconds. Searching for potential cross-reactive allergens ... p8A8

Cross-Reactive allergen predicted with high confidence using : a) high PCC and b) high sequence indentity:

Correlation Sequence Patch Center Total residue View Molecule Compare
Allergen Name PCC Identity Residue No Results
Sch_c_1.0101
1.00 100 277 576 View PDB file
Sch_c_1.0101
0.66 100 276 576 View PDB file
Sch_c_1.0101
0.60 100 162 576 View PDB file

Cross-Reactive allergen predicted with medium confidence using : a) high PCC and b) moderate sequence indentity:

Correlation Sequence Patch Center Total residue View Molecule Compare
Allergen Name PCC Identity Residue No Results
Bla_g_11.0101
0.75 32.1 68 515 View PDB file
Per_a_11.0101
0.69 33.3 337 494 View PDB file
Mus_a_2.0101
0.64 42.1 239 318 View PDB file
Mus_a_2.0101
0.63 42.1 265 318 View PDB file
Mus_a_2.0101
0.63 42.1 236 318 View PDB file
Amb_a_4.0101
0.62 43.3 54 164 View PDB file
Per_a_11.0101
0.59 33.3 404 494 View PDB file
Mus_a_2.0101
0.58 42.1 184 318 View PDB file
Mus_a_2.0101
0.58 42.1 134 318 View PDB file
Bla_g_11.0101
0.55 32.1 128 515 View PDB file
Per_a_11.0101
0.53 33.3 156 494 View PDB file
Per_a_11.0101
0.51 33.3 169 494 View PDB file
Amb_a_4.0101
0.51 43.3 47 164 View PDB file
Bla_g_11.0101
0.50 32.1 211 515 View PDB file

The project was successfully completed. Thank you for using CrossReact: Webserver to predict crossreactivity between allergenic proteins.

Please cite Cross-React method and website http://curie.utmb.edu/ for your future publications. In case of error contact Surendra S Negi ssnegiATutmb.edu .

Cross-React method is developed and designed by Surendra Negi. Please cite our publication in your work (Negi SS and Braun W, Cross-React: a new structural bioinformatics method for predicting allergen cross-reactivity. Bioinformatics 33 (7): 1014-1020, 2017). The Table format is made possible with the help of chives tables by chives

The project started on: Sat Apr 27 13:09:37 2024 , current time is: Sat Apr 27 13:09:46 2024 . For more information visit http://curie.utmb.edu/Cross-React.html

Thanks for using SDAP Database