Searching millions of patches.. Please wait. Approxinate wait time is ~2min.

(You can also access your files after the search at : http://fermi.utmb.edu/tmp/CrossReact179.html )

Welcome to Prediction of allergen cross reactivity server.

Please wait, this page will load automatically . Your project SDCR.1231 started on: Tue Nov 28 17:15:32 2023

Please note: Sequence identity is based on user defined PDB file and 3D allergen structures in SDAP database.

Avergae time for project completion is about 90 Seconds. Searching for potential cross-reactive allergens ... p8A8

Cross-Reactive allergen predicted with high confidence using : a) high PCC and b) high sequence indentity:

Correlation Sequence Patch Center Total residue View Molecule Compare
Allergen Name PCC Identity Residue No Results
Ole_e_1.0101
0.95 100 41 415 View PDB file
Ole_e_1.0101
0.95 100 40 415 View PDB file
Ole_e_1.0101
0.94 100 39 415 View PDB file
Ole_e_1.0101
0.93 100 37 415 View PDB file
Ole_e_1.0101
0.84 100 38 415 View PDB file
Ole_e_1.0101
0.82 100 36 415 View PDB file
Ole_e_1.0101
0.72 100 42 415 View PDB file
Ole_e_1.0101
0.61 100 46 415 View PDB file
Ole_e_1.0101
0.61 100 43 415 View PDB file
Ole_e_1.0101
0.60 100 45 415 View PDB file
Ole_e_1.0101
0.59 100 54 415 View PDB file
Ole_e_1.0101
0.56 100 44 415 View PDB file
Ole_e_1.0101
0.55 100 259 415 View PDB file
Ole_e_1.0101
0.54 100 155 415 View PDB file
Ole_e_1.0101
0.54 100 97 415 View PDB file
Ole_e_1.0101
0.52 100 159 415 View PDB file
Ole_e_1.0101
0.51 100 82 415 View PDB file
Ole_e_1.0101
0.50 100 34 415 View PDB file

Cross-Reactive allergen predicted with medium confidence using : a) high PCC and b) moderate sequence indentity:

Correlation Sequence Patch Center Total residue View Molecule Compare
Allergen Name PCC Identity Residue No Results
Tri_r_2.0101
0.64 31.1 118 412 View PDB file
Tri_r_2.0101
0.64 31.1 89 412 View PDB file
Tri_r_2.0101
0.63 31.1 119 412 View PDB file
Tri_r_2.0101
0.61 31.1 43 412 View PDB file
Asp_f_9
0.61 40.4 213 302 View PDB file
Tri_r_2.0101
0.59 31.1 302 412 View PDB file
Asp_f_9
0.58 40.4 211 302 View PDB file
Tri_r_2.0101
0.56 31.1 68 412 View PDB file
Asp_f_9
0.56 40.4 121 302 View PDB file
Tri_r_2.0101
0.55 31.1 301 412 View PDB file
Asp_f_9
0.55 40.4 204 302 View PDB file
Tri_r_2.0101
0.54 31.1 45 412 View PDB file
Tri_r_2.0101
0.54 31.1 40 412 View PDB file
Asp_f_9
0.54 40.4 171 302 View PDB file
Tri_r_2.0101
0.53 31.1 117 412 View PDB file
Tri_r_2.0101
0.53 31.1 110 412 View PDB file
Tri_r_2.0101
0.53 31.1 67 412 View PDB file
Tri_r_2.0101
0.52 31.1 271 412 View PDB file
Tri_r_2.0101
0.52 31.1 69 412 View PDB file
Asp_f_9
0.52 40.4 192 302 View PDB file
Asp_f_9
0.52 40.4 107 302 View PDB file
Act_d_9.0101
0.52 30.8 84 109 View PDB file
Act_d_9.0101
0.52 30.8 83 109 View PDB file
Tri_r_2.0101
0.50 31.1 270 412 View PDB file
Tri_r_2.0101
0.50 31.1 180 412 View PDB file
Tri_r_2.0101
0.50 31.1 88 412 View PDB file
Tri_r_2.0101
0.50 31.1 66 412 View PDB file
Asp_f_9
0.50 40.4 157 302 View PDB file

The project was successfully completed. Thank you for using CrossReact: Webserver to predict crossreactivity between allergenic proteins.

Please cite Cross-React method and website http://curie.utmb.edu/ for your future publications. In case of error contact Surendra S Negi ssnegiATutmb.edu .

Cross-React method is developed and designed by Surendra Negi. Please cite our publication in your work (Negi SS and Braun W, Cross-React: a new structural bioinformatics method for predicting allergen cross-reactivity. Bioinformatics 33 (7): 1014-1020, 2017). The Table format is made possible with the help of chives tables by chives

The project started on: Tue Nov 28 17:15:32 2023 , current time is: Tue Nov 28 17:15:45 2023 . For more information visit http://curie.utmb.edu/Cross-React.html

Thanks for using SDAP Database