Searching millions of patches.. Please wait. Approxinate wait time is ~2min.

(You can also access your files after the search at : http://fermi.utmb.edu/tmp/CrossReact158.html )


Welcome to Prediction of allergen cross reactivity server.

Please wait, this page will load automatically . Your project SDCR.1823 started on: Tue Feb 27 17:41:04 2024

Please note: Sequence identity is based on user defined PDB file and 3D allergen structures in SDAP database.

Avergae time for project completion is about 90 Seconds. Searching for potential cross-reactive allergens ... p8A8

Cross-Reactive allergen predicted with high confidence using : a) high PCC and b) high sequence indentity:

Correlation Sequence Patch Center Total residue View Molecule Compare
Allergen Name PCC Identity Residue No Results
Tri_a_41.0101
0.95 100 42 60 View PDB file
Tri_a_41.0101
0.94 100 41 60 View PDB file
Tri_a_41.0101
0.91 100 39 60 View PDB file
Tri_a_41.0101
0.87 100 43 60 View PDB file
Tri_a_41.0101
0.85 100 40 60 View PDB file
Tri_a_41.0101
0.76 100 37 60 View PDB file
Tri_a_41.0101
0.74 100 38 60 View PDB file
Tri_a_41.0101
0.73 100 50 60 View PDB file
Tri_a_41.0101
0.71 100 36 60 View PDB file
Tri_a_41.0101
0.60 100 2 60 View PDB file
Tri_a_41.0101
0.58 100 1 60 View PDB file
Tri_a_41.0101
0.57 100 54 60 View PDB file
Tri_a_41.0101
0.50 100 53 60 View PDB file
Tri_a_41.0101
0.50 100 3 60 View PDB file

Cross-Reactive allergen predicted with medium confidence using : a) high PCC and b) moderate sequence indentity:

Correlation Sequence Patch Center Total residue View Molecule Compare
Allergen Name PCC Identity Residue No Results
Cup_s_7.0101
0.52 31.2 33 113 View PDB file
Jun_a_7.0101
0.51 31.2 45 63 View PDB file
Cup_s_7.0101
0.50 31.2 95 113 View PDB file
Cry_j_7.0101
0.50 34.4 45 63 View PDB file
Cup_s_7.0102
0.50 31.2 45 63 View PDB file

The project was successfully completed. Thank you for using CrossReact: Webserver to predict crossreactivity between allergenic proteins.

Please cite Cross-React method and website http://curie.utmb.edu/ for your future publications. In case of error contact Surendra S Negi ssnegiATutmb.edu .

Cross-React method is developed and designed by Surendra Negi. Please cite our publication in your work (Negi SS and Braun W, Cross-React: a new structural bioinformatics method for predicting allergen cross-reactivity. Bioinformatics 33 (7): 1014-1020, 2017). The Table format is made possible with the help of chives tables by chives

The project started on: Tue Feb 27 17:41:04 2024 , current time is: Tue Feb 27 17:41:06 2024 . For more information visit http://curie.utmb.edu/Cross-React.html


Thanks for using SDAP Database