Searching millions of patches.. Please wait. Approxinate wait time is ~2min.

(You can also access your files after the search at : http://fermi.utmb.edu/tmp/CrossReact149.html )

Welcome to Prediction of allergen cross reactivity server.

Please wait, this page will load automatically . Your project SDCR.1636 started on: Tue Nov 28 16:39:02 2023

Please note: Sequence identity is based on user defined PDB file and 3D allergen structures in SDAP database.

Avergae time for project completion is about 90 Seconds. Searching for potential cross-reactive allergens ... p8A8

Cross-Reactive allergen predicted with high confidence using : a) high PCC and b) high sequence indentity:

Correlation Sequence Patch Center Total residue View Molecule Compare
Allergen Name PCC Identity Residue No Results
Ole_e_1.0101
0.96 100 40 415 View PDB file
Ole_e_1.0101
0.92 100 41 415 View PDB file
Ole_e_1.0101
0.89 100 39 415 View PDB file
Ole_e_1.0101
0.79 100 42 415 View PDB file
Ole_e_1.0101
0.79 100 37 415 View PDB file
Ole_e_1.0101
0.71 100 38 415 View PDB file
Ole_e_1.0101
0.64 100 43 415 View PDB file
Ole_e_1.0101
0.63 100 45 415 View PDB file
Ole_e_1.0101
0.62 100 36 415 View PDB file
Ole_e_1.0101
0.59 100 82 415 View PDB file
Ole_e_1.0101
0.59 100 46 415 View PDB file
Ole_e_1.0101
0.56 100 155 415 View PDB file
Ole_e_1.0101
0.56 100 54 415 View PDB file
Ole_e_1.0101
0.56 100 49 415 View PDB file
Ole_e_1.0101
0.56 100 44 415 View PDB file
Ole_e_1.0101
0.54 100 259 415 View PDB file
Ole_e_1.0101
0.53 100 97 415 View PDB file
Ole_e_1.0101
0.52 100 154 415 View PDB file
Ole_e_1.0101
0.51 100 159 415 View PDB file
Ole_e_1.0101
0.50 100 331 415 View PDB file
Ole_e_1.0101
0.50 100 269 415 View PDB file
Ole_e_1.0101
0.50 100 172 415 View PDB file
Ole_e_1.0101
0.50 100 68 415 View PDB file

Cross-Reactive allergen predicted with medium confidence using : a) high PCC and b) moderate sequence indentity:

Correlation Sequence Patch Center Total residue View Molecule Compare
Allergen Name PCC Identity Residue No Results
Tri_r_2.0101
0.68 31.1 119 412 View PDB file
Tri_r_2.0101
0.65 31.1 301 412 View PDB file
Tri_r_2.0101
0.65 31.1 180 412 View PDB file
Act_d_9.0101
0.65 30.8 84 109 View PDB file
Tri_r_2.0101
0.64 31.1 118 412 View PDB file
Asp_f_9
0.64 40.4 213 302 View PDB file
Asp_f_9
0.64 40.4 121 302 View PDB file
Tri_r_2.0101
0.59 31.1 302 412 View PDB file
Act_d_9.0101
0.59 30.8 77 109 View PDB file
Act_d_9.0101
0.59 30.8 75 109 View PDB file
Tri_r_2.0101
0.58 31.1 68 412 View PDB file
Tri_r_2.0101
0.58 31.1 43 412 View PDB file
Asp_f_9
0.58 40.4 192 302 View PDB file
Asp_f_9
0.58 40.4 190 302 View PDB file
Act_d_9.0101
0.58 30.8 83 109 View PDB file
Tri_r_2.0101
0.57 31.1 303 412 View PDB file
Tri_r_2.0101
0.57 31.1 271 412 View PDB file
Asp_f_9
0.57 40.4 211 302 View PDB file
Asp_f_9
0.57 40.4 159 302 View PDB file
Act_d_9.0101
0.56 30.8 76 109 View PDB file
Tri_r_2.0101
0.55 31.1 69 412 View PDB file
Tri_r_2.0101
0.54 31.1 20 412 View PDB file
Tri_r_2.0101
0.53 31.1 270 412 View PDB file
Tri_r_2.0101
0.53 31.1 245 412 View PDB file
Tri_r_2.0101
0.53 31.1 89 412 View PDB file
Asp_f_9
0.53 40.4 191 302 View PDB file
Asp_f_9
0.53 40.4 161 302 View PDB file
Act_d_9.0101
0.53 30.8 82 109 View PDB file
Act_d_9.0101
0.53 30.8 74 109 View PDB file
Tri_r_2.0101
0.52 31.1 250 412 View PDB file
Tri_r_2.0101
0.52 31.1 67 412 View PDB file
Tri_r_2.0101
0.52 31.1 44 412 View PDB file
Tri_r_2.0101
0.50 31.1 45 412 View PDB file

The project was successfully completed. Thank you for using CrossReact: Webserver to predict crossreactivity between allergenic proteins.

Please cite Cross-React method and website http://curie.utmb.edu/ for your future publications. In case of error contact Surendra S Negi ssnegiATutmb.edu .

Cross-React method is developed and designed by Surendra Negi. Please cite our publication in your work (Negi SS and Braun W, Cross-React: a new structural bioinformatics method for predicting allergen cross-reactivity. Bioinformatics 33 (7): 1014-1020, 2017). The Table format is made possible with the help of chives tables by chives

The project started on: Tue Nov 28 16:39:02 2023 , current time is: Tue Nov 28 16:39:16 2023 . For more information visit http://curie.utmb.edu/Cross-React.html

Thanks for using SDAP Database