Searching millions of patches.. Please wait. Approxinate wait time is ~2min.

(You can also access your files after the search at : http://fermi.utmb.edu/tmp/CrossReact135.html )

Welcome to Prediction of allergen cross reactivity server.

Please wait, this page will load automatically . Your project SDCR.1268 started on: Tue Nov 28 03:51:05 2023

Please note: Sequence identity is based on user defined PDB file and 3D allergen structures in SDAP database.

Avergae time for project completion is about 90 Seconds. Searching for potential cross-reactive allergens ... p8A8

Cross-Reactive allergen predicted with high confidence using : a) high PCC and b) high sequence indentity:

Correlation Sequence Patch Center Total residue View Molecule Compare
Allergen Name PCC Identity Residue No Results
Ole_e_1.0101
0.95 100 394 415 View PDB file
Ole_e_1.0101
0.95 100 393 415 View PDB file
Ole_e_1.0101
0.93 100 391 415 View PDB file
Ole_e_1.0101
0.87 100 392 415 View PDB file
Ole_e_1.0101
0.77 100 86 415 View PDB file
Ole_e_1.0101
0.76 100 396 415 View PDB file
Ole_e_1.0101
0.75 100 85 415 View PDB file
Ole_e_1.0101
0.72 100 390 415 View PDB file
Ole_e_1.0101
0.70 100 89 415 View PDB file
Ole_e_1.0101
0.64 100 61 415 View PDB file
Ole_e_1.0101
0.61 100 39 415 View PDB file
Ole_e_1.0101
0.56 100 57 415 View PDB file
Ole_e_1.0101
0.56 100 54 415 View PDB file
Ole_e_1.0101
0.55 100 83 415 View PDB file
Ole_e_1.0101
0.54 100 45 415 View PDB file
Ole_e_1.0101
0.53 100 284 415 View PDB file
Ole_e_1.0101
0.53 100 41 415 View PDB file
Ole_e_1.0101
0.52 100 397 415 View PDB file
Ole_e_1.0101
0.51 100 38 415 View PDB file

Cross-Reactive allergen predicted with medium confidence using : a) high PCC and b) moderate sequence indentity:

Correlation Sequence Patch Center Total residue View Molecule Compare
Allergen Name PCC Identity Residue No Results
Asp_f_9
0.68 40.4 171 302 View PDB file
Asp_f_9
0.66 40.4 169 302 View PDB file
Tri_r_2.0101
0.60 31.1 129 412 View PDB file
Tri_r_2.0101
0.58 31.1 55 412 View PDB file
Asp_f_9
0.55 40.4 172 302 View PDB file
Asp_f_9
0.55 40.4 164 302 View PDB file
Asp_f_9
0.54 40.4 165 302 View PDB file
Tri_r_2.0101
0.53 31.1 150 412 View PDB file
Tri_r_2.0101
0.53 31.1 130 412 View PDB file
Tri_r_2.0101
0.53 31.1 56 412 View PDB file
Asp_f_9
0.53 40.4 139 302 View PDB file
Asp_f_9
0.53 40.4 92 302 View PDB file
Act_d_9.0101
0.53 30.8 5 109 View PDB file
Asp_f_9
0.52 40.4 181 302 View PDB file
Asp_f_9
0.52 40.4 30 302 View PDB file
Act_d_9.0101
0.52 30.8 63 109 View PDB file
Act_d_9.0101
0.52 30.8 6 109 View PDB file
Asp_f_9
0.51 40.4 193 302 View PDB file
Asp_f_9
0.51 40.4 69 302 View PDB file
Tri_r_2.0101
0.50 31.1 120 412 View PDB file
Asp_f_9
0.50 40.4 83 302 View PDB file

The project was successfully completed. Thank you for using CrossReact: Webserver to predict crossreactivity between allergenic proteins.

Please cite Cross-React method and website http://curie.utmb.edu/ for your future publications. In case of error contact Surendra S Negi ssnegiATutmb.edu .

Cross-React method is developed and designed by Surendra Negi. Please cite our publication in your work (Negi SS and Braun W, Cross-React: a new structural bioinformatics method for predicting allergen cross-reactivity. Bioinformatics 33 (7): 1014-1020, 2017). The Table format is made possible with the help of chives tables by chives

The project started on: Tue Nov 28 03:51:05 2023 , current time is: Tue Nov 28 03:51:17 2023 . For more information visit http://curie.utmb.edu/Cross-React.html

Thanks for using SDAP Database