Searching millions of patches.. Please wait. Approxinate wait time is ~2min.

(You can also access your files after the search at : http://fermi.utmb.edu/tmp/CrossReact176.html )

Welcome to Prediction of allergen cross reactivity server.

Please wait, this page will load automatically . Your project SDCR.1499 started on: Mon Apr 29 03:49:34 2024

Please note: Sequence identity is based on user defined PDB file and 3D allergen structures in SDAP database.

Avergae time for project completion is about 90 Seconds. Searching for potential cross-reactive allergens ... p8A8

Cross-Reactive allergen predicted with high confidence using : a) high PCC and b) high sequence indentity:

Correlation Sequence Patch Center Total residue View Molecule Compare
Allergen Name PCC Identity Residue No Results
Act_d_6.0101
0.77 100 44 185 View PDB file
Act_d_6.0101
0.76 100 42 185 View PDB file
Act_d_6.0101
0.72 100 43 185 View PDB file
Act_d_6.0101
0.67 100 47 185 View PDB file
Act_d_6.0101
0.66 100 154 185 View PDB file
Act_d_6.0101
0.65 100 157 185 View PDB file
Act_d_6.0101
0.65 100 46 185 View PDB file
Act_d_6.0101
0.63 100 153 185 View PDB file
Act_d_6.0101
0.60 100 58 185 View PDB file
Act_d_6.0101
0.59 100 155 185 View PDB file
Act_d_6.0101
0.52 100 158 185 View PDB file
Act_d_6.0101
0.52 100 152 185 View PDB file
Act_d_6.0101
0.52 100 101 185 View PDB file
Act_d_6.0101
0.51 100 156 185 View PDB file
Act_d_6.0101
0.51 100 105 185 View PDB file
Act_d_6.0101
0.51 100 102 185 View PDB file
Act_d_6.0101
0.51 100 98 185 View PDB file
Act_d_6.0101
0.50 100 96 185 View PDB file

Cross-Reactive allergen predicted with medium confidence using : a) high PCC and b) moderate sequence indentity:

Correlation Sequence Patch Center Total residue View Molecule Compare
Allergen Name PCC Identity Residue No Results
Pla_a_1
0.66 30.4 155 179 View PDB file
Pla_or_1.0101
0.64 32.9 146 170 View PDB file
Pla_a_1
0.63 30.4 157 179 View PDB file
Pla_or_1.0101
0.63 32.9 148 170 View PDB file
Chi_t_3
0.52 30.4 101 160 View PDB file
Pla_a_1
0.50 30.4 55 179 View PDB file
Pla_a_1
0.50 30.4 39 179 View PDB file

The project was successfully completed. Thank you for using CrossReact: Webserver to predict crossreactivity between allergenic proteins.

Please cite Cross-React method and website http://curie.utmb.edu/ for your future publications. In case of error contact Surendra S Negi ssnegiATutmb.edu .

Cross-React method is developed and designed by Surendra Negi. Please cite our publication in your work (Negi SS and Braun W, Cross-React: a new structural bioinformatics method for predicting allergen cross-reactivity. Bioinformatics 33 (7): 1014-1020, 2017). The Table format is made possible with the help of chives tables by chives

The project started on: Mon Apr 29 03:49:34 2024 , current time is: Mon Apr 29 03:49:39 2024 . For more information visit http://curie.utmb.edu/Cross-React.html

Thanks for using SDAP Database