Searching millions of patches.. Please wait. Approxinate wait time is ~2min.

(You can also access your files after the search at : http://fermi.utmb.edu/tmp/CrossReact181.html )

Welcome to Prediction of allergen cross reactivity server.

Please wait, this page will load automatically . Your project SDCR.1816 started on: Fri May 3 00:41:56 2024

Please note: Sequence identity is based on user defined PDB file and 3D allergen structures in SDAP database.

Avergae time for project completion is about 90 Seconds. Searching for potential cross-reactive allergens ... p8A8

Cross-Reactive allergen predicted with high confidence using : a) high PCC and b) high sequence indentity:

Correlation Sequence Patch Center Total residue View Molecule Compare
Allergen Name PCC Identity Residue No Results
Api_d_1.0101
1.00 100 90 134 View PDB file
Api_d_1.0101
0.97 100 89 134 View PDB file
Api_d_1.0101
0.94 100 91 134 View PDB file
Api_c_1.0101
0.94 90.3 91 134 View PDB file
Api_d_1.0101
0.90 100 87 134 View PDB file
Api_c_1.0101
0.90 90.3 90 134 View PDB file
Api_m_1
0.87 91.8 118 162 View PDB file
Api_d_1.0101
0.85 100 86 134 View PDB file
Api_c_1.0101
0.84 90.3 89 134 View PDB file
Api_m_1
0.82 91.8 119 162 View PDB file
Api_c_1.0101
0.79 90.3 87 134 View PDB file
Api_d_1.0101
0.76 100 92 134 View PDB file
Api_c_1.0101
0.76 90.3 92 134 View PDB file
Api_m_1
0.75 91.8 115 162 View PDB file
Api_d_1.0101
0.74 100 85 134 View PDB file
Api_c_1.0101
0.73 90.3 86 134 View PDB file
Api_m_1
0.71 91.8 114 162 View PDB file
Api_m_1
0.65 91.8 117 162 View PDB file
Api_m_1
0.61 91.8 120 162 View PDB file
Api_m_1
0.58 91.8 113 162 View PDB file
Api_c_1.0101
0.58 90.3 85 134 View PDB file
Api_m_1
0.56 91.8 21 162 View PDB file
Api_d_1.0101
0.56 100 14 134 View PDB file
Api_c_1.0101
0.56 90.3 14 134 View PDB file
Api_m_1
0.55 91.8 35 162 View PDB file
Api_d_1.0101
0.55 100 2 134 View PDB file
Api_c_1.0101
0.55 90.3 2 134 View PDB file
Api_d_1.0101
0.54 100 7 134 View PDB file
Api_c_1.0101
0.54 90.3 7 134 View PDB file
Api_m_1
0.53 91.8 24 162 View PDB file
Api_m_1
0.52 91.8 106 162 View PDB file
Api_m_1
0.52 91.8 42 162 View PDB file
Api_m_1
0.52 91.8 30 162 View PDB file
Api_d_1.0101
0.52 100 134 134 View PDB file
Api_d_1.0101
0.52 100 82 134 View PDB file
Api_d_1.0101
0.52 100 78 134 View PDB file
Api_c_1.0101
0.52 90.3 78 134 View PDB file
Api_m_1
0.51 91.8 47 162 View PDB file
Api_d_1.0101
0.51 100 81 134 View PDB file
Api_c_1.0101
0.51 90.3 19 134 View PDB file
Api_m_1
0.50 91.8 154 162 View PDB file
Api_d_1.0101
0.50 100 13 134 View PDB file
Api_c_1.0101
0.50 90.3 13 134 View PDB file

Cross-Reactive allergen predicted with medium confidence using : a) high PCC and b) moderate sequence indentity:

Correlation Sequence Patch Center Total residue View Molecule Compare
Allergen Name PCC Identity Residue No Results
Ara_t_expansin
0.75 38.7 63 265 View PDB file
Bom_p_1.0101
0.67 54.4 40 136 View PDB file
Bom_p_1.0101
0.67 54.4 14 136 View PDB file
Ara_t_expansin
0.64 38.7 100 265 View PDB file
Bom_t_1
0.64 52.2 14 136 View PDB file
Ara_t_expansin
0.63 38.7 67 265 View PDB file
Bom_p_1.0101
0.62 54.4 2 136 View PDB file
Bom_p_1.0101
0.62 54.4 1 136 View PDB file
Ara_t_expansin
0.61 38.7 151 265 View PDB file
Bom_p_1.0101
0.59 54.4 7 136 View PDB file
Bom_t_1
0.58 52.2 11 136 View PDB file
Bom_p_1.0101
0.57 54.4 13 136 View PDB file
Bom_t_1
0.56 52.2 13 136 View PDB file
Bom_t_1
0.56 52.2 2 136 View PDB file
Ara_t_expansin
0.55 38.7 106 265 View PDB file
Bom_p_1.0101
0.55 54.4 102 136 View PDB file
Ara_t_expansin
0.54 38.7 66 265 View PDB file
Bom_p_1.0101
0.54 54.4 11 136 View PDB file
Bom_t_1
0.54 52.2 120 136 View PDB file
Bom_t_1
0.54 52.2 102 136 View PDB file
Bom_p_1.0101
0.53 54.4 15 136 View PDB file
Ara_t_expansin
0.52 38.7 170 265 View PDB file
Bom_p_1.0101
0.52 54.4 120 136 View PDB file
Bom_p_1.0101
0.52 54.4 39 136 View PDB file
Bom_p_1.0101
0.51 54.4 91 136 View PDB file
Bom_p_1.0101
0.51 54.4 60 136 View PDB file
Bom_p_1.0101
0.51 54.4 37 136 View PDB file
Bom_p_1.0101
0.51 54.4 19 136 View PDB file
Bom_p_1.0101
0.51 54.4 10 136 View PDB file
Ara_t_expansin
0.50 38.7 99 265 View PDB file
Ara_t_expansin
0.50 38.7 64 265 View PDB file
Bom_p_1.0101
0.50 54.4 118 136 View PDB file
Bom_p_1.0101
0.50 54.4 20 136 View PDB file
Bom_t_1
0.50 52.2 7 136 View PDB file
Bom_t_1
0.50 52.2 1 136 View PDB file

The project was successfully completed. Thank you for using CrossReact: Webserver to predict crossreactivity between allergenic proteins.

Please cite Cross-React method and website http://curie.utmb.edu/ for your future publications. In case of error contact Surendra S Negi ssnegiATutmb.edu .

Cross-React method is developed and designed by Surendra Negi. Please cite our publication in your work (Negi SS and Braun W, Cross-React: a new structural bioinformatics method for predicting allergen cross-reactivity. Bioinformatics 33 (7): 1014-1020, 2017). The Table format is made possible with the help of chives tables by chives

The project started on: Fri May 3 00:41:56 2024 , current time is: Fri May 3 00:42:05 2024 . For more information visit http://curie.utmb.edu/Cross-React.html

Thanks for using SDAP Database