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                SDAP 2.0 - Structural Database of Allergenic Proteins
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Werner Braun      Submit new allergen information to SDAP
  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

Access to SDAP is available free of charge for Academic and non-profit use.< Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu). Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Allergen Info Description
Allergen ID 793
Allergen Scientific Name Arg r 1
Allergen Species - Systematic Name Argas reflexus
Allergen Species - Common Name pigeon tick
Allergen Common source others
Allergen Common name
Allergen Keywords N
Allergen IUIS (Yes=1, No=0) 1
ID Allergen Name
Arg r 1 - References
ID Reference
Pubmed ID: 15753913
Hilger C, Bessot JC, Hutt N, Grigioni F, De Blay F, Pauli G, Hentges F. IgE-mediated anaphylaxis caused by bites of the pigeon tick Argas reflexus: cloning and expression of the major allergen Arg r 1. J Allergy Clin Immunol. 2005 Mar;115(3):617-22.
Arg r 1 - Protein Sequences
Source Link to source
GenBank 58371884
Arg r 1 - PDB Structure
PDB Id PDB Name PDB Entry Deposition Date Experiment Type Observation
793 269 2X45 2010-01-28 X-ray diffraction resolution 1.40 A
793 270 2X46 2010-01-28 X-ray diffraction resolution 1.00 A
2X46.pdb


Arg r 1 - Sequence Search :
Sequence Header Sequence
Arg r 1
SDAP Sequence ID: 868
SDAP Allergen ID: 793
MALIILLVACLSVVSADDCSGKTDAWTSIKGPKTGGYWLKQTTKTGENECTYVKGTDFKENTKTATYTYGYKDASGKLTKTTGTATAKGSDIVVGSDTSTVIYTDGKTCDVVKHGGHTELWVHSSKTSGGYNNCCDKKFTETRGSTPANEVYKKCPGMP
View 3D Structure Click here to view 3D model structure of allergen
Fasta Search in SDAP
Blast Swissprot database search at NCBI
Blast PDB database search at NCBI
Blast NR database search at NCBI
Arg r 1 - Statistics from Alphafold ( SI is sequence id, Best template format: PDB_ChainID)
Allergen Name pLDDT Score pTM Score Best PDB template %Seq ID Align length Seq length Query Range Sequence Range E-Value Bit Score Download Model
Arg r 1 92.55 0.8 2X45_A 100 143 159 17 - 159 2 - 144 0 286 Download (SI: 868)
Arg r 1 - Alphafold Theoretical Model Structure
Model Structure
868_relaxed_rank_1_model_1.pdb


Coverage Plddt
Arg r 1 - Protein Sequence Properties!
Protein Sequence Protease cleavage sites PeptideCutter at ExPASy
58371884 Click here to process the data
Arg r 1 - PFAM Information
SeqID Aller ID AlnS AlnE EnvS EnvE PFAM ID Family Type Clan Description
868 793 23 141 20 142 PF02098 His_binding Domain CL0116 Tick histamine binding protein
Where: AlnS= Alignment start position, AlnE= Alignment end position, EnvS= Envelope start position, EnvE= Envelope end position.

List of B-cell epitopes predicted by BepiPred method using a window size of 9 amino acids

Cleck here for epitopes predicted by BepiPred method
Arg r 1 - Epitope Information from published data
No. Position Epitope Sequence Epitope Type View epitope Search epitope in SDAP PD search in SDAP Cross-React search
No epitope information found!
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