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                SDAP 2.0 - Structural Database of Allergenic Proteins
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Werner Braun      Submit new allergen information to SDAP
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

Access to SDAP is available free of charge for Academic and non-profit use.< Licenses for commercial use can be obtained by contacting W. Braun ( Secure access to SDAP is available from

Allergen Info Description
Allergen ID 1922
Allergen Scientific Name Bet v 1.0107
Allergen Species - Systematic Name Betula verrucosa (Betula pendula)
Allergen Species - Common Name White birch
Allergen Common source tree
Allergen Common name Fagales
Allergen Keywords Pathogenesis-related protein, PR-10, Bet v 1 family member
Allergen IUIS (Yes=1, No=0) 1
Bet v 1.0107 - References
ID Reference
Pubmed ID: 7852325
Swoboda I, Jilek A, Ferreira F, Engel E, Hoffmann-Sommergruber K, Scheiner O, Kraft D, Breiteneder H, Pittenauer E, Schmid E, et al. Isoforms of Bet v 1, the major birch pollen allergen, analyzed by liquid chromatography, mass spectrometry, and cDNA cloning. J Biol Chem. 1995 Feb 10;270(6):2607-13. doi: 10.1074/jbc.270.6.2607. PMID: 7852325.
Pubmed ID: 8627171
Ferreira F, Hirtenlehner K, Jilek A, Godnik-Cvar J, Breiteneder H, Grimm R, Hoffmann-Sommergruber K, Scheiner O, Kraft D, Breitenbach M, Rheinberger HJ, Ebner C. Dissection of immunoglobulin E and T lymphocyte reactivity of isoforms of the major birch pollen allergen Bet v 1: potential use of hypoallergenic isoforms for immunotherapy. J Exp Med. 1996 Feb 1;183(2):599-609. doi: 10.1084/jem.183.2.599. PMID: 8627171; PMCID: PMC2192443.
Bet v 1.0107 - Protein Sequences
Source Link to source
GenBank CAA54489
Bet v 1.0107 - PDB Structure
PDB Id PDB Name PDB Entry Deposition Date Experiment Type Observation
1922 337 1FM4 1970 X-ray diffraction resolution 1.97 A Crystal Structure of Birch Pollen Allergen Bet v 1l

Bet v 1.0107 - Sequence Search :
Sequence Header Sequence
Bet v 1.0107
SDAP Sequence ID: 1664
SDAP Allergen ID: 1922
View 3D Structure Click here to view 3D model structure of allergen
Fasta Search in SDAP
Blast Swissprot database search at NCBI
Blast PDB database search at NCBI
Blast NR database search at NCBI
Bet v 1.0107 - Statistics from Alphafold ( SI is sequence id, Best template format: PDB_ChainID)
Allergen Name pLDDT Score pTM Score Best PDB template %Seq ID Align length Seq length Query Range Sequence Range E-Value Bit Score Download Model
Bet v 1.0107 95.6 0.86 1FM4_A 100 159 160 2 - 160 1 - 159 0 325 Download (SI: 1664)
Bet v 1.0107 - Alphafold Theoretical Model Structure
Model Structure

Coverage Plddt
Bet v 1.0107 - Protein Sequence Properties!
Protein Sequence Protease cleavage sites PeptideCutter at ExPASy
CAA54489 Click here to process the data
Bet v 1.0107 - PFAM Information
SeqID Aller ID AlnS AlnE EnvS EnvE PFAM ID Family Type Clan Description
1664 1922 1 155 1 155 PF00407 Bet_v_1 Domain CL0209 Pathogenesis-related protein Bet v 1 family
Where: AlnS= Alignment start position, AlnE= Alignment end position, EnvS= Envelope start position, EnvE= Envelope end position.

List of B-cell epitopes predicted by BepiPred method using a window size of 9 amino acids

Cleck here for epitopes predicted by BepiPred method
Bet v 1.0107 - Epitope Information from published data
No. Position Epitope Sequence Epitope Type View epitope Search epitope in SDAP PD search in SDAP Cross-React search
No epitope information found!
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