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Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology



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                SDAP 2.0 - Structural Database of Allergenic Proteins
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Werner Braun      Submit new allergen information to SDAP
  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

Access to SDAP is available free of charge for Academic and non-profit use.< Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu). Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Allergen Info Description
Allergen ID 1113
Allergen Scientific Name Car b 1.0110
Allergen Species - Systematic Name Carpinus betulus
Allergen Species - Common Name hornbeam
Allergen Common source tree
Allergen Common name Fagales
Allergen Keywords Pathogenesis-related protein, PR-10
Allergen IUIS (Yes=1, No=0) 1
Car b 1.0110 - References
ID Reference
No reference found!
Car b 1.0110 - Protein Sequences
Source Link to source
GenBank 167472839
Car b 1.0110 - Sequence Search :
Sequence Header Sequence
Car b 1.0110
SDAP Sequence ID: 1032
SDAP Allergen ID: 1113
MGVFNYEAETPSVIPAARLFKSYVLDGDKLIPKVAPQAISSVENVGGNGGPGTIKNITFAEGSPFKFVKERVDEVDNANFKYNYTVIEGDVLGDKLEKVSHELKIVAAPGGGSVVKISSKFHAKGDHEVNAEEMKGAKEMAEKLLRAVESYLLAHTAEYN
View 3D Structure Click here to view 3D model structure of allergen
Fasta Search in SDAP
Blast Swissprot database search at NCBI
Blast PDB database search at NCBI
Blast NR database search at NCBI
Car b 1.0110 - Statistics from Alphafold ( SI is sequence id, Best template format: PDB_ChainID)
Allergen Name pLDDT Score pTM Score Best PDB template %Seq ID Align length Seq length Query Range Sequence Range E-Value Bit Score Download Model
Car b 1.0110 93.3 0.82 7MXL_C 73.75 160 160 1 - 160 1 - 160 0 249 Download (SI: 1032)
Car b 1.0110 - Alphafold Theoretical Model Structure
Model Structure
1032_relaxed_rank_1_model_2.pdb


Coverage Plddt
Car b 1.0110 - Protein Sequence Properties!
Protein Sequence Protease cleavage sites PeptideCutter at ExPASy
167472839 Click here to process the data
Car b 1.0110 - PFAM Information
SeqID Aller ID AlnS AlnE EnvS EnvE PFAM ID Family Type Clan Description
1032 1113 1 155 1 155 PF00407 Bet_v_1 Domain CL0209 Pathogenesis-related protein Bet v 1 family
Where: AlnS= Alignment start position, AlnE= Alignment end position, EnvS= Envelope start position, EnvE= Envelope end position.

List of B-cell epitopes predicted by BepiPred method using a window size of 9 amino acids

Cleck here for epitopes predicted by BepiPred method
Car b 1.0110 - Epitope Information from published data
No. Position Epitope Sequence Epitope Type View epitope Search epitope in SDAP PD search in SDAP Cross-React search
No epitope information found!
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