The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology



SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board
New Allergen Submission form

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)
Allergome Database

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
FSSP
iProClass
ProtoMap
SCOP
VAST

Bioinformatics Servers
BLAST @ NCBI
FASTA @ EMBL-EBI
Peptide Match @ PIR
ClustalW @ EMBL - EBI


                SDAP 2.0 - Structural Database of Allergenic Proteins
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Werner Braun      Submit new allergen information to SDAP
  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

Access to SDAP is available free of charge for Academic and non-profit use.< Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu). Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Allergen Info Description
Allergen ID 1665
Allergen Scientific Name Cul q 3.01
Allergen Species - Systematic Name Culex quinquefasciatus
Allergen Species - Common Name Southern house mosquito
Allergen Common source insects
Allergen Common name Animalia Arthropoda
Allergen Keywords Salivary odorant binding protein 2
Allergen IUIS (Yes=1, No=0) 1
Cul q 3.01 - References
ID Reference
Pubmed ID: 32099589
Opasawatchai A, Yolwong W, Thuncharoen W, Inrueangsri N, Itsaradisaikul S, Sasisakulporn C, Jotikasthira W, Matangkasombut O, Reamtong O, Manuyakorn W, Songnuan W, Matangkasombut P. Novel salivary gland allergens from tropical mosquito species and IgE reactivity in allergic patients. World Allergy Organ J. 2020 Feb 17;13(2):100099. doi: 10.1016/j.waojou.2020.100099. PMID: 32099589; PMCID: PMC7031643
Cul q 3.01 - Protein Sequences
Source Link to source
GenBank Q95V93
Cul q 3.01 - Sequence Search :
Sequence Header Sequence
Cul q 3.01
SDAP Sequence ID: 1432
SDAP Allergen ID: 1665
MKALIFLGAIIAGVLSDEWSPMDPEEVAFEEAKCMEDHFGNDFGLAEKWMKWSLAESDGKTACYVKCLVEALGMYDKQAFQPNNIKQQYEAYKSDNGVDQTKGDAIANELGKIDAKDGKCESIAKGFIQVNNANKGVLEKIYLLDSSVRDAIYKKNPQIKPKGISIFRFCGKQFYQDGEAAYCNVRKHGFSDDPKFIKHSNCTTRGMRWMKKNGEMDESAILRGLHAVNENGKDDVVKKSLQNCKAKDESKARDYYKCIYDGLGEQLFMKVLDYIEVRSENYSYRLREATSKYDANAMRSKVKALDSEAKC
View 3D Structure Click here to view 3D model structure of allergen
Fasta Search in SDAP
Blast Swissprot database search at NCBI
Blast PDB database search at NCBI
Blast NR database search at NCBI
Cul q 3.01 - Statistics from Alphafold ( SI is sequence id, Best template format: PDB_ChainID)
Allergen Name pLDDT Score pTM Score Best PDB template %Seq ID Align length Seq length Query Range Sequence Range E-Value Bit Score Download Model
Cul q 3.01 93.75 0.83 6V4C_A 100 295 311 17 - 311 1 - 295 0 612 Download (SI: 1432)
Cul q 3.01 - Alphafold Theoretical Model Structure
Model Structure
1432_relaxed_rank_1_model_1.pdb


Coverage Plddt
Cul q 3.01 - Protein Sequence Properties!
Protein Sequence Protease cleavage sites PeptideCutter at ExPASy
Q95V93 Click here to process the data
Cul q 3.01 - PFAM Information
SeqID Aller ID AlnS AlnE EnvS EnvE PFAM ID Family Type Clan Description
1432 1665 32 108 17 127 PF01395 PBP_GOBP Domain No_clan PBP/GOBP family
1432 1665 182 260 155 262 PF01395 PBP_GOBP Domain No_clan PBP/GOBP family
Where: AlnS= Alignment start position, AlnE= Alignment end position, EnvS= Envelope start position, EnvE= Envelope end position.

List of B-cell epitopes predicted by BepiPred method using a window size of 9 amino acids

Cleck here for epitopes predicted by BepiPred method
Cul q 3.01 - Epitope Information from published data
No. Position Epitope Sequence Epitope Type View epitope Search epitope in SDAP PD search in SDAP Cross-React search
No epitope information found!
SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Surendra Negi
Copyright   2001-2023  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.