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                SDAP 2.0 - Structural Database of Allergenic Proteins
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Werner Braun      Submit new allergen information to SDAP
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

Access to SDAP is available free of charge for Academic and non-profit use.< Licenses for commercial use can be obtained by contacting W. Braun ( Secure access to SDAP is available from

Allergen Info Description
Allergen ID 1129
Allergen Scientific Name Cup s 3.0101
Allergen Species - Systematic Name Cupressus sempervirens
Allergen Species - Common Name common cypress
Allergen Common source tree
Allergen Common name Pinales
Allergen Keywords Thaumatin-like protein
Allergen IUIS (Yes=1, No=0) 1
Cup s 3.0101 - References
ID Reference
No reference found!
Cup s 3.0101 - Protein Sequences
Source Link to source
GenBank 38456226
Cup s 3.0101 - Sequence Search :
Sequence Header Sequence
Cup s 3.0101
SDAP Sequence ID: 1042
SDAP Allergen ID: 1129
View 3D Structure Click here to view 3D model structure of allergen
Fasta Search in SDAP
Blast Swissprot database search at NCBI
Blast PDB database search at NCBI
Blast NR database search at NCBI
Cup s 3.0101 - Statistics from Alphafold ( SI is sequence id, Best template format: PDB_ChainID)
Allergen Name pLDDT Score pTM Score Best PDB template %Seq ID Align length Seq length Query Range Sequence Range E-Value Bit Score Download Model
Cup s 3.0101 92.55 0.79 1Z3Q_A 55.721 201 225 29 - 225 3 - 200 0 237 Download (SI: 1042)
Cup s 3.0101 - Alphafold Theoretical Model Structure
Model Structure

Coverage Plddt
Cup s 3.0101 - Protein Sequence Properties!
Protein Sequence Protease cleavage sites PeptideCutter at ExPASy
38456226 Click here to process the data
Cup s 3.0101 - PFAM Information
SeqID Aller ID AlnS AlnE EnvS EnvE PFAM ID Family Type Clan Description
1042 1129 33 225 33 225 PF00314 Thaumatin Domain CL0293 Thaumatin family
Where: AlnS= Alignment start position, AlnE= Alignment end position, EnvS= Envelope start position, EnvE= Envelope end position.

List of B-cell epitopes predicted by BepiPred method using a window size of 9 amino acids

Cleck here for epitopes predicted by BepiPred method
Cup s 3.0101 - Epitope Information from published data
No. Position Epitope Sequence Epitope Type View epitope Search epitope in SDAP PD search in SDAP Cross-React search
1 36-53 RYTVWAAGLPGGGKRLDQ IgE Click here to find exact epitope Click here to find similar epitopes Click here for Cross-React search
2 60-69 NLAAGTASAR IgE Click here to find exact epitope Click here to find similar epitopes Click here for Cross-React search
3 73-79 RTGCTFD IgE Click here to find exact epitope Click here to find similar epitopes Click here for Cross-React search

Epitope Reference ( ID 36): A. Barre, H. Senecha. Nguyen, C. Granier, P. Poncet, P. Rouge, Structural Basis for the IgE-Binding Cross-Reacting Epitopic Peptides of Cup s 3, a PR-5 Thaumatin-like Protein Allergen from Common Cypress (Cupressus sempervirens) Pollen. Allergies 2023, 3, 11-24
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