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                SDAP 2.0 - Structural Database of Allergenic Proteins
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Werner Braun      Submit new allergen information to SDAP
  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

Access to SDAP is available free of charge for Academic and non-profit use.< Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu). Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Allergen Info Description
Allergen ID 1775
Allergen Scientific Name Pac c 3.0101
Allergen Species - Systematic Name Pachycondyla chinensis
Allergen Species - Common Name Asian needle ant
Allergen Common source insects
Allergen Common name Animalia Arthropoda
Allergen Keywords Antigen 5
Allergen IUIS (Yes=1, No=0) 1
Pac c 3.0101 - References
ID Reference
Pubmed ID: 19178543
Lee EK, Jeong KY, Lyu DP, Lee YW, Sohn JH, Lim KJ, Hong CS, Park JW. Characterization of the major allergens of Pachycondyla chinensis in ant sting anaphylaxis patients. Clin Exp Allergy. 2009 Apr;39(4):602-7. doi: 10.1111/j.1365-2222.2008.03181.x. Epub 2009 Jan 22. PMID: 19178543.
Pubmed ID: 27043037
Jeong KY, Yi MH, Son M, Lyu D, Lee JH, Yong TS, Park JW. IgE Reactivity of Recombinant Pac c 3 from the Asian Needle Ant (Pachycondyla chinensis). Int Arch Allergy Immunol. 2016;169(2):93-100. doi: 10.1159/000444364. Epub 2016 Apr 5. PMID: 27043037.
Pac c 3.0101 - Protein Sequences
Source Link to source
GenBank C0ITL3
Pac c 3.0101 - Sequence Search :
Sequence Header Sequence
Pac c 3.0101
SDAP Sequence ID: 1531
SDAP Allergen ID: 1775
TEGGAVHTMCQYTSPQPSPNCGTYSNAHITAADKETILKVHNDERQKVKAGQETRGNPGPQPAASNMPDLTWDNELAAIAQRWVNQCKIGHDGCRNVERYQVGQNIAMSGSTAKGPCNMNNLVQMWINEVNALNAADVSSMPSDGNYFMKIGHYTQLVWGKTTKVGCGIIQFLDGKFYKCYLACNYGPAGNMFGAPIYQ
View 3D Structure Click here to view 3D model structure of allergen
Fasta Search in SDAP
Blast Swissprot database search at NCBI
Blast PDB database search at NCBI
Blast NR database search at NCBI
Pac c 3.0101 - Statistics from Alphafold ( SI is sequence id, Best template format: PDB_ChainID)
Allergen Name pLDDT Score pTM Score Best PDB template %Seq ID Align length Seq length Query Range Sequence Range E-Value Bit Score Download Model
Pac c 3.0101 97 0.86 2VZN_A 57.143 196 199 5 - 199 14 - 209 0 241 Download (SI: 1531)
Pac c 3.0101 - Alphafold Theoretical Model Structure
Model Structure
1531_relaxed_rank_1_model_3.pdb


Coverage Plddt
Pac c 3.0101 - Protein Sequence Properties!
Protein Sequence Protease cleavage sites PeptideCutter at ExPASy
C0ITL3 Click here to process the data
Pac c 3.0101 - PFAM Information
SeqID Aller ID AlnS AlnE EnvS EnvE PFAM ID Family Type Clan Description
1531 1775 38 186 38 186 PF00188 CAP Domain CL0659 Cysteine-rich secretory protein family
Where: AlnS= Alignment start position, AlnE= Alignment end position, EnvS= Envelope start position, EnvE= Envelope end position.

List of B-cell epitopes predicted by BepiPred method using a window size of 9 amino acids

Cleck here for epitopes predicted by BepiPred method
Pac c 3.0101 - Epitope Information from published data
No. Position Epitope Sequence Epitope Type View epitope Search epitope in SDAP PD search in SDAP Cross-React search
No epitope information found!
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