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                SDAP 2.0 - Structural Database of Allergenic Proteins
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Werner Braun      Submit new allergen information to SDAP
  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

Access to SDAP is available free of charge for Academic and non-profit use.< Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu). Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Allergen Info Description
Allergen ID 131
Allergen Scientific Name Rat n 1
Allergen Species - Systematic Name Rattus norvegius
Allergen Species - Common Name rat (urine)
Allergen Common source animals
Allergen Common name
Allergen Keywords Major urinary protein (MUP); Alpha-2u-globulin 15.5 kDa fatty acid binding prote
Allergen IUIS (Yes=1, No=0) 1
ID Allergen Name
Rat n 1 - References
ID Reference
Pubmed ID: 15663569
Jeal H, Draper A, Harris J, Taylor AN, Cullinan P, Jones M, Determination of the T cell epitopes of the lipocalin allergen, Rat n 1. Clin Exp Allergy. 2004 Dec;34(12):1919-25.
Rat n 1 - Protein Sequences
Source Link to source
SwissProt P02761
Rat n 1 - PDB Structure
PDB Id PDB Name PDB Entry Deposition Date Experiment Type Observation
131 195 2A2U 19-NOV-98 X-ray diffraction resolution 2.50 A
2A2U.pdb


Rat n 1 - Sequence Search :
Sequence Header Sequence
Rat n 1
SDAP Sequence ID: 247
SDAP Allergen ID: 131
MKLLLLLLCLGLTLVCGHAEEASSTRGNLDVAKLNGDWFSIVVASNKREKIEENGSMRVFMQHIDVLENSLGFKFRIKENGECRELYLVAYKTPEDGEYFVEYDGGNTFTILKTDYDRYVMFHLINFKNGETFQLMVLYGRTKDLSSDIKEKFAKLCEAHGITRDNIIDLTKTDRCLQARG
View 3D Structure Click here to view 3D model structure of allergen
Fasta Search in SDAP
Blast Swissprot database search at NCBI
Blast PDB database search at NCBI
Blast NR database search at NCBI
Rat n 1 - Statistics from Alphafold ( SI is sequence id, Best template format: PDB_ChainID)
Allergen Name pLDDT Score pTM Score Best PDB template %Seq ID Align length Seq length Query Range Sequence Range E-Value Bit Score Download Model
Rat n 1 88.45 0.75 2A2G_A 100 181 181 1 - 181 1 - 181 0 372 Download (SI: 247)
Rat n 1 - Alphafold Theoretical Model Structure
Model Structure
247_relaxed_rank_1_model_3.pdb


Coverage Plddt
Rat n 1 - Protein Sequence Properties!
Protein Sequence Protease cleavage sites PeptideCutter at ExPASy
P02761 Click here to process the data
Rat n 1 - PFAM Information
SeqID Aller ID AlnS AlnE EnvS EnvE PFAM ID Family Type Clan Description
247 131 35 174 35 174 PF00061 Lipocalin Domain CL0116 Lipocalin / cytosolic fatty-acid binding protein family
Where: AlnS= Alignment start position, AlnE= Alignment end position, EnvS= Envelope start position, EnvE= Envelope end position.

List of B-cell epitopes predicted by BepiPred method using a window size of 9 amino acids

Cleck here for epitopes predicted by BepiPred method
Rat n 1 - Epitope Information from published data
No. Position Epitope Sequence Epitope Type View epitope Search epitope in SDAP PD search in SDAP Cross-React search
No epitope information found!
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