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Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology



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                SDAP 2.0 - Structural Database of Allergenic Proteins
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Werner Braun      Submit new allergen information to SDAP
  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP
Allergen Info Description
Allergen ID 1851
Allergen Scientific Name Sal s 6.0102
Allergen Species - Systematic Name Salmo salar
Allergen Species - Common Name Atlantic salmon
Allergen Common source food
Allergen Common name Animalia Chordata
Allergen Keywords Collagen alpha
Allergen IUIS (Yes=1, No=0) 1
Sal s 6.0102 - References
ID Reference
No reference found!
Sal s 6.0102 - Protein Sequences
Source Link to source
GenBank XP_014048044
Sal s 6.0102 - Sequence Search :
Sequence Header Sequence
Sal s 6.0102
SDAP Sequence ID: 1601
SDAP Allergen ID: 1851
MFSFVDIRLALLLSATVLLARGQGEDDRTAGSCTLDGQFYNDRDVWKPEPCQICVCDSGTVMCDEVICEDTSDCPNPVIPHDECCPICPDDGFQEPKVEGPQGDRGAKGEPGAPGFPGNDGIPGQPGLPGPPGPPGPPGLGGNFSPQMSGGFDEKSGGGMSMPGPMGPMGPRGPPGPPGSSGPQGFTGPPGEPGEAGSSGPMGPRGPAGPPGKNGDDGESGKPGRPGERGASGPQGARGFPGTPGLPGIKGHRGFSGLDGAKGETGPAGPKGEAGASGENGAAGAMGPRGLPGERGRAGPNGAAGARGNDGAAGAAGPPGPTGPAGAPGFPGGPGAKGEVGAQGARGGEGPQGSRGEAGNPGPAGAAGPAGNNGADGNPGTKGAPGSAGIAGAPGFPGPRGPPGPQGAGGAPGPKGNTGEVGATGAKGEAGAKGESGPAGVQGPAGPAGEEGKRGSRGEPGAAGARGAPGERGGPGSRGFPGADGAAGPKGGPGERGGAGVAGAKGNTGEPGRNGEPGMPGSKGMTGSPGSPGPDGKTGPSGAGGQDGRPGPPGPVGARGQPGVMGFPGPKGAAGEGGKPGERGVMGPGGAVGAPGKDGDVGAPGAPGVAGPAGERGEQGAGGPPGFQGLPGPQGAIGETGKPGEQGLPGEGGAPGSAGSRGDRGFPGERGAPGPSGPAGARGSPGSAGNDGAKGEAGAAGAPGGQGPPGLQGMPGERGAGGLPGLKGDRGDQGVKGADGAGGKDGARGMTGPIGPNGPAGSPGDKGETGAPGAVGPSGARGAPGERGESGAPGPAGFAGPPGGDGQPGAKGEAGDNGAKGDGGAQGPAGPTGAPGPQGPAGNTGAKGARGAAGPPGATGFPGAAGRVGPPGPSGNNGPPGPPGPGGKEGQKGNRGETGPAGRPGELGAAGPPGAQGEKGQPGGDGPNGPSGTPGPQGIGGQRGIVGLPGQRGERGFPGLAGQLGEPGKQGPGGPSGERGPPGPMGPPGLAGAPGEPGREGTPGNEGSSGRDGAAGPKGERGESGVAGASGAPGPPGAPGPVGPAGKSGDRGESGPAGPAGIAGPAGPRGPSGPAGARGDKGEAGEAGERGMKGHRGFTGMQGPPGPSGQSGESGPAGASGPAGPRGPSGSAGAAGKDGMSGLPGPIGPPGPRGRSGEMGPSGPPGPPGPPGPPGPPGGGFDMGFIAQPAQEKAPDPFRHFRADDANVMRDRDLEVDTTLKSLSQQIENIRSPEGTKKNPARTCRDLKMCHPDWKSGEYWIDPDQGCTQDAIKVYCNMETGETCVYPIEADIPKKSWYTSKNIKEKKHVWFGEAMTDGFQFEYGSEGSSAQDVNIQLTFLRLMATEASQNITYHCKNSIAYMDQQSGNLKKSLLLQGSNEIEIRAEGNSRFTYSVTEDGCTSHTGAWGKTVIDYKTTKTSRLPIIDIAPMDVGAPNQEFGIEVGPVCFL
View 3D Structure Click here to view 3D model structure of allergen
Fasta Search in SDAP
Blast Swissprot database search at NCBI
Blast PDB database search at NCBI
Blast NR database search at NCBI
Sal s 6.0102 - Protein Sequence Properties!
Protein Sequence Protease cleavage sites PeptideCutter at ExPASy
XP_014048044 Click here to process the data
Sal s 6.0102 - PFAM Information
SeqID Aller ID AlnS AlnE EnvS EnvE PFAM ID Family Type Clan Description
1601 1851 33 88 33 88 PF00093 VWC Domain CL0451 von Willebrand factor type C domain
1601 1851 99 143 95 149 PF01391 Collagen Repeat No_clan Collagen triple helix repeat (20 copies)
1601 1851 164 222 161 223 PF01391 Collagen Repeat No_clan Collagen triple helix repeat (20 copies)
1601 1851 221 279 221 280 PF01391 Collagen Repeat No_clan Collagen triple helix repeat (20 copies)
1601 1851 281 339 277 344 PF01391 Collagen Repeat No_clan Collagen triple helix repeat (20 copies)
1601 1851 647 704 647 706 PF01391 Collagen Repeat No_clan Collagen triple helix repeat (20 copies)
1601 1851 764 822 764 823 PF01391 Collagen Repeat No_clan Collagen triple helix repeat (20 copies)
1601 1851 1118 1176 1118 1183 PF01391 Collagen Repeat No_clan Collagen triple helix repeat (20 copies)
1601 1851 1213 1448 1212 1448 PF01410 COLFI Family CL0422 Fibrillar collagen C-terminal domain
Where: AlnS= Alignment start position, AlnE= Alignment end position, EnvS= Envelope start position, EnvE= Envelope end position.

List of B-cell epitopes predicted by BepiPred method using a window size of 9 amino acids

Cleck here for epitopes predicted by BepiPred method
Sal s 6.0102 - Epitope Information from published data
No. Position Epitope Sequence Epitope Type View epitope Search epitope in SDAP PD search in SDAP Cross-React search
No epitope information found!
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