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                SDAP 2.0 - Structural Database of Allergenic Proteins
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Werner Braun      Submit new allergen information to SDAP
  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP
Allergen Info Description
Allergen ID 333
Allergen Scientific Name Sola t 1
Allergen Species - Systematic Name Solanum tuberosum
Allergen Species - Common Name potato
Allergen Common source foods
Allergen Common name
Allergen Keywords patatin
Allergen IUIS (Yes=1, No=0) 1
ID Allergen Name
Sola t 1 - References
ID Reference
Pubmed ID: 11879037
Koppelman SJ, van Koningsveld GA, Knulst AC, Gruppen H, Pigmans IG, de Jongh HH. Effect of heat-induced aggregation on the IgE binding of patatin (Sol t 1) is dominated by other potato proteins. J Agric Food Chem. 2002 Mar 13;50(6):1562-8.
Sola t 1 - Protein Sequences
Source Link to source
GenBank 129641
GenBank 21514
GenBank 21510
GenBank 169500
GenBank 21512
Sola t 1 - Theoretical Model Structure
Model ID PDB file PDB Snapshot PDB Snapshot 90 PDB Snapshot 180 PDB Snapshot 270 3D PDB View
523 GetModel Model Pic Model Pic Model Pic Model Pic Click here
628 GetModel Model Pic Model Pic Model Pic Model Pic Click here
629 GetModel Model Pic Model Pic Model Pic Model Pic Click here
Sola t 1 - Sequence Search :
Sequence Header Sequence
Sola t 1
SDAP Sequence ID: 523
SDAP Allergen ID: 333
LFFMILATTSSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIFNYSGSIFGPRYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSIAAAPIYFPPHHFVTHTSNGATYEFNLVDGGVATVGDPALLSLSVATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLAIQQLTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPETYEEALKRFAKLLSNRKKLRANKASY
View 3D Structure Click here to view 3D model structure of allergen
Fasta Search in SDAP
Blast Swissprot database search at NCBI
Blast PDB database search at NCBI
Blast NR database search at NCBI
Sola t 1
SDAP Sequence ID: 628
SDAP Allergen ID: 333
MATTKSFLILFFMILATTSSTCATLGEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIFNYSGSIFGPRYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAESPQLDAKMYDICYSTAAAPIYFPPHHFVTHTSNGATYEFNLVDGAVATVGDPALLSLSVATRLAQDDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLAIQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPETYEEALKRFAKLLSDRKKLRANKASH
View 3D Structure Click here to view 3D model structure of allergen
Fasta Search in SDAP
Blast Swissprot database search at NCBI
Blast PDB database search at NCBI
Blast NR database search at NCBI
Sola t 1
SDAP Sequence ID: 629
SDAP Allergen ID: 333
MATTKSFLILFFMILATTSSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIFNYSGSILGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHHFVTHTSNGARYEFNLVDGAVATVGDPALLSLSVATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLAIQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALNGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPETYEEALKRFAKLLSDRKKLRANKASH
View 3D Structure Click here to view 3D model structure of allergen
Fasta Search in SDAP
Blast Swissprot database search at NCBI
Blast PDB database search at NCBI
Blast NR database search at NCBI
Sola t 1
SDAP Sequence ID: 630
SDAP Allergen ID: 333
MATTKSFLILFFMILATTSSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIFNYSGSIIGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFITHTSNGDIYEFNLVDGGVATVGDPALLSLSVATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAQEAAKWGPLRWMLAIQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPETYEEALKRFAKLLSDRKKLRANKASY
View 3D Structure Click here to view 3D model structure of allergen
Fasta Search in SDAP
Blast Swissprot database search at NCBI
Blast PDB database search at NCBI
Blast NR database search at NCBI
Sola t 1
SDAP Sequence ID: 631
SDAP Allergen ID: 333
MATTNSFTILIFMILATTSSTFATLGEMVTVLSIDGGGIKGIIPATILEFLEGQLQEVDNNTDARLADYFDVIGGTSTGGLLTAMITTPNETNRPFAAAKDIVPFYFEHGPKIFQSSGSIFGPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPTFFPPHYFATNTSNGDKYEFNLVDGAVATVDDPALLSISVATKLAQVDPKFASIKSLNYKQMLLLSLGTGTTSEFDKTYTAEETAKWGTARWMLVIQKMTSAASSYMTDYYLSTAFQALDSQNNYLRVQENALTGTTTELDDASEANMQLLVQVGEDLLKKSVSKDNPETYEEALKRFAKLLSDRKKLRANKASY
View 3D Structure Click here to view 3D model structure of allergen
Fasta Search in SDAP
Blast Swissprot database search at NCBI
Blast PDB database search at NCBI
Blast NR database search at NCBI
Sola t 1 - Statistics from Alphafold ( SI is sequence id, Best template format: PDB_ChainID)
Allergen Name pLDDT Score pTM Score Best PDB template %Seq ID Align length Seq length Query Range Sequence Range E-Value Bit Score Download Model
Sola t 1 91.5 0.83 4PK9_A 86.849 365 386 22 - 386 9 - 373 0 638 Download (SI: 630)
Sola t 1 92.05 0.84 4PK9_A 86.575 365 386 22 - 386 9 - 373 0 634 Download (SI: 629)
Sola t 1 92.35 0.85 4PK9_A 85.753 365 377 13 - 377 9 - 373 0 629 Download (SI: 523)
Sola t 1 92.3 0.84 4PK9_A 89.315 365 386 22 - 386 9 - 373 0 654 Download (SI: 631)
Sola t 1 91.8 0.87 4PK9_A 86.575 365 386 22 - 386 9 - 373 0 636 Download (SI: 628)
Sola t 1 - Alphafold Theoretical Model Structure
Model Structure
631_relaxed_rank_1_model_1.pdb


Coverage Plddt
Sola t 1 - Protein Sequence Properties!
Protein Sequence Protease cleavage sites PeptideCutter at ExPASy
129641 Click here to process the data
21514 Click here to process the data
21510 Click here to process the data
169500 Click here to process the data
21512 Click here to process the data
Sola t 1 - PFAM Information
SeqID Aller ID AlnS AlnE EnvS EnvE PFAM ID Family Type Clan Description
523 333 23 210 23 220 PF01734 Patatin Family CL0323 Patatin-like phospholipase
628 333 32 219 32 229 PF01734 Patatin Family CL0323 Patatin-like phospholipase
629 333 32 219 32 229 PF01734 Patatin Family CL0323 Patatin-like phospholipase
630 333 32 219 32 229 PF01734 Patatin Family CL0323 Patatin-like phospholipase
631 333 32 219 32 229 PF01734 Patatin Family CL0323 Patatin-like phospholipase
Where: AlnS= Alignment start position, AlnE= Alignment end position, EnvS= Envelope start position, EnvE= Envelope end position.

List of B-cell epitopes predicted by BepiPred method using a window size of 9 amino acids

Cleck here for epitopes predicted by BepiPred method
Sola t 1 - Epitope Information from published data
No. Position Epitope Sequence Epitope Type View epitope Search epitope in SDAP PD search in SDAP Cross-React search
No epitope information found!
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